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66_004_scaffold_82

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_82_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99..1475
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKE1_CLOPE
hypothetical protein
MATE efflux family protein {ECO:0000313|EMBL:EIA16974.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_82_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1841..2650)
DNA (810bp) protein (270aa)
Metal (Zinc) transport protein (ABC transporter permease) zurM n=10 Tax=Clostridium perfringens RepID=H7CWI8_CLOPF
metal (zinc) transport protein (ABC transporter permease) zurM; K09816 zinc transport system permease protein
Putative zinc ABC transporter, permease protein {ECO:0000313|EMBL:EDT26925.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_82_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2669..3337)
DNA (669bp) protein (223aa)
ABC-type iron (III) transport system, ATPase; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-]
Putative zinc ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQ04_CLOPF
Putative zinc ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABG87446.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_004_scaffold_82_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3410..3745)
DNA (336bp) protein (112aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CWI6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14858.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_82_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3914..4312
DNA (399bp) protein (133aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CWI5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16970.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_004_scaffold_82_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4333..6132
DNA (1800bp) protein (600aa)
Oligoendopeptidase F {ECO:0000313|EMBL:EDT26257.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDT26257.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
pepF; oligoendopeptidase F (EC:3.4.24.-); K08602 oligoendopeptidase F [EC:3.4.24.-]
Oligoendopeptidase F n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIG9_CLOPF
66_004_scaffold_82_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6150..7178
DNA (1029bp) protein (343aa)
Rhomboid family protein n=3 Tax=Clostridium perfringens RepID=B1RIG8_CLOPF
Rhomboid family protein {ECO:0000313|EMBL:EDT26276.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
rhomboid family protein
66_004_scaffold_82_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7291..8262
DNA (972bp) protein (324aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XKE9_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26259.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_82_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8278..8907
DNA (630bp) protein (210aa)
ribonuclease HI; K03469 ribonuclease HI [EC:3.1.26.4]
Putative ribonuclease HI n=2 Tax=Clostridium perfringens RepID=Q0TQF1_CLOP1
Putative ribonuclease HI {ECO:0000313|EMBL:EDT26283.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_82_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8956..9147
DNA (192bp) protein (64aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=Q0ST03_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87148.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_004_scaffold_82_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9445..10746
DNA (1302bp) protein (434aa)
Helix-turn-helix domain-containing protein n=7 Tax=Clostridium perfringens RepID=H7CWH9_CLOPF
DNA-binding protein {ECO:0000313|EMBL:EDT14882.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
helix-turn-helix domain-containing protein
66_004_scaffold_82_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10763..12028
DNA (1266bp) protein (422aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1R6U3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24067.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_82_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12691..14751)
DNA (2061bp) protein (687aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium perfringens RepID=Q0TQF4_CLOP1
Probable transcriptional regulator {ECO:0000313|EMBL:BAB81151.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
AraC family transcriptional regulator
66_004_scaffold_82_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15002..15295
DNA (294bp) protein (98aa)
GIY-YIG domain protein n=2 Tax=Clostridium perfringens RepID=Q0TQF5_CLOP1
GIY-YIG domain-containing protein; K07461 putative endonuclease
GIY-YIG domain protein {ECO:0000313|EMBL:ABG86894.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_004_scaffold_82_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15273..15893
DNA (621bp) protein (207aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CWH5_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT14846.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_82_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16101..16898
DNA (798bp) protein (266aa)
Formate/nitrite transporter n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V795_CLOPF
Formate/nitrite transporter {ECO:0000313|EMBL:EDT70304.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
fnt; formate/nitrite transporter
66_004_scaffold_82_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17116..17808
DNA (693bp) protein (231aa)
Crp/FNR family transcriptional regulator n=5 Tax=Clostridium perfringens RepID=H7CWH3_CLOPF
Crp/FNR family transcriptional regulator
Crp/FNR family transcriptional regulator {ECO:0000313|EMBL:EIA16958.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_82_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18049..19065
DNA (1017bp) protein (339aa)
Sulfite reductase, iron-sulfur subunit n=2 Tax=Clostridium perfringens RepID=B1BN66_CLOPF
Sulfite reductase, iron-sulfur subunit {ECO:0000313|EMBL:EDS78758.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
sulfite reductase, iron-sulfur subunit
66_004_scaffold_82_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19058..19849
DNA (792bp) protein (264aa)
Anaerobic sulfite reductase, subunit B n=6 Tax=Clostridium perfringens RepID=Q0ST12_CLOPS
asrB; anaerobic sulfite reductase subunit B
Anaerobic sulfite reductase, subunit B {ECO:0000313|EMBL:EDT14864.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_82_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19863..20843
DNA (981bp) protein (327aa)
arsC; anaerobic sulfite reductase subunit C; K00385 anaerobic sulfite reductase subunit C [EC:1.8.1.-]
Anaerobic sulfite reductase, subunit C n=9 Tax=Clostridium perfringens RepID=Q0TQG1_CLOP1
Anaerobic sulfite reductase, subunit C {ECO:0000313|EMBL:EDT26263.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_82_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21271..22473
DNA (1203bp) protein (401aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hemA; glutamyl-tRNA reductase (EC:1.2.1.-); K02492 glutamyl-tRNA reductase [EC:1.2.1.70]
Glutamyl-tRNA reductase n=2 Tax=Clostridium perfringens RepID=H7CWG9_CLOPF
66_004_scaffold_82_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22437..23099
DNA (663bp) protein (221aa)
precorrin-2 dehydrogenase; K02304 precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4]
Precorrin-2 dehydrogenase n=1 Tax=Clostridium perfringens F262 RepID=H7CWG8_CLOPF
Precorrin-2 dehydrogenase {ECO:0000313|EMBL:EIA16953.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_82_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23157..24032
DNA (876bp) protein (292aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Porphobilinogen deaminase n=4 Tax=Clostridium perfringens RepID=HEM3_CLOP1
66_004_scaffold_82_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24041..25519
DNA (1479bp) protein (493aa)
hemD; uroporphyrinogen-III methyltransferase/synthase (EC:2.1.1.107 4.2.1.75); K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
Uroporphyrinogen III synthase/methyltransferase n=1 Tax=Clostridium perfringens F262 RepID=H7CWG6_CLOPF
Uroporphyrinogen III synthase/methyltransferase {ECO:0000313|EMBL:EIA16951.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_82_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25576..26541
DNA (966bp) protein (322aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24]
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Delta-aminolevulinic acid dehydratase n=10 Tax=Clostridium perfringens RepID=H7CWG5_CLOPF
66_004_scaffold_82_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26604..27881
DNA (1278bp) protein (426aa)
hemL; glutamate-1-semialdehyde aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Glutamate-1-semialdehyde 2,1-aminomutase n=4 Tax=Clostridium perfringens RepID=B1R6T0_CLOPF
66_004_scaffold_82_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28080..29705
DNA (1626bp) protein (542aa)
Pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6S9_CLOPF
Pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EDT24004.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
pyridine nucleotide-disulfide oxidoreductase
66_004_scaffold_82_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29871..30431)
DNA (561bp) protein (187aa)
cls; cardiolipin synthase (EC:2.7.8.-); K06131 cardiolipin synthase [EC:2.7.8.-]
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Cardiolipin synthase n=2 Tax=Clostridium perfringens RepID=B1RIE7_CLOPF
66_004_scaffold_82_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30524..30817)
DNA (294bp) protein (98aa)
cls; cardiolipin synthase (EC:2.7.8.-); K06131 cardiolipin synthase [EC:2.7.8.-]
Cardiolipin synthase {ECO:0000256|HAMAP-Rule:MF_01916}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01916};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01916};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Cardiolipin synthase n=2 Tax=Clostridium perfringens RepID=B1RIE7_CLOPF
66_004_scaffold_82_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30897..32438)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CWG1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16946.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying items 1-30 of 43 in total

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