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66_004_scaffold_86

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Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
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66_004_scaffold_86_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(542..3061)
DNA (2520bp) protein (840aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
DNA gyrase subunit A n=2 Tax=Clostridium perfringens RepID=B1RTP9_CLOPF
66_004_scaffold_86_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3083..4999)
DNA (1917bp) protein (639aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
DNA gyrase subunit B n=8 Tax=Clostridium perfringens RepID=Q0TV59_CLOP1
66_004_scaffold_86_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5236..5529)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RTQ1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT70221.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_004_scaffold_86_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5510..6595)
DNA (1086bp) protein (362aa)
DNA replication and repair protein RecF n=11 Tax=Clostridium perfringens RepID=RECF_CLOP1
recF; recombination protein F; K03629 DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_86_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6651..6857)
DNA (207bp) protein (69aa)
S4 domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CRF3_CLOPF
S4 domain-containing protein
S4 domain protein {ECO:0000313|EMBL:EDT22249.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_86_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6983..8083)
DNA (1101bp) protein (367aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
DNA polymerase III subunit beta n=11 Tax=Clostridium perfringens RepID=H7CRF2_CLOPF
66_004_scaffold_86_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8379..9752)
DNA (1374bp) protein (458aa)
Chromosomal replication initiator protein DnaA n=7 Tax=Clostridium perfringens RepID=DNAA_CLOP1
dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein
Chromosomal replication initiator protein DnaA {ECO:0000255|HAMAP-Rule:MF_00377}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_86_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10783..10917
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=11 Tax=Clostridium perfringens RepID=RL34_CLOP1
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34
50S ribosomal protein L34 {ECO:0000255|HAMAP-Rule:MF_00391}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_004_scaffold_86_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10978..11355
DNA (378bp) protein (126aa)
rnpA; ribonuclease P (EC:3.1.26.5); K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ribonuclease P protein component n=11 Tax=Clostridium perfringens RepID=RNPA_CLOP1
66_004_scaffold_86_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11327..11536
DNA (210bp) protein (70aa)
Putative membrane protein insertion efficiency factor n=11 Tax=Clostridium perfringens RepID=YIDD_CLOP1
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_86_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11570..12286
DNA (717bp) protein (239aa)
Membrane protein OxaA n=3 Tax=Clostridium perfringens RepID=B1BI62_CLOPF
Membrane protein OxaA {ECO:0000313|EMBL:EDS80489.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
spoIIIJ; inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC
66_004_scaffold_86_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12328..12951
DNA (624bp) protein (208aa)
SpoIIIJ-associated protein n=3 Tax=Clostridium perfringens RepID=Q8XH29_CLOPE
jag; SpoIIIJ-associated protein; K06346 spoIIIJ-associated protein
R3H domain protein {ECO:0000313|EMBL:EDT13623.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_86_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13291..14667
DNA (1377bp) protein (459aa)
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
tRNA modification GTPase MnmE n=9 Tax=Clostridium perfringens RepID=MNME_CLOP1
66_004_scaffold_86_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14682..16574
DNA (1893bp) protein (631aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Clostridium perfringens RepID=B1RJH0_CLOPF
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_004_scaffold_86_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16737..17456
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
gidB; 16S rRNA methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G n=4 Tax=Clostridium perfringens RepID=H7D011_CLOPF
66_004_scaffold_86_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17706..18479
DNA (774bp) protein (258aa)
Sporulation initiation inhibitor protein soj n=10 Tax=Clostridium perfringens RepID=H7D010_CLOPF
soj; sporulation initiation inhibitor protein soj; K03496 chromosome partitioning protein
Spo0A activation inhibitor {ECO:0000313|EMBL:BAB82358.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_86_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18480..19340
DNA (861bp) protein (287aa)
Stage 0 sporulation protein J n=9 Tax=Clostridium perfringens RepID=H7D009_CLOPF
stage 0 sporulation protein J; K03497 chromosome partitioning protein, ParB family
Stage 0 sporulation protein J {ECO:0000313|EMBL:EDT13601.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_86_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19389..19886
DNA (498bp) protein (166aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D008_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25916.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_86_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20038..20628)
DNA (591bp) protein (197aa)
Putative sporulation protein YyaC n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXG9_CLOPF
Putative sporulation protein YyaC {ECO:0000313|EMBL:EDT13606.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sporulation protein YyaC
66_004_scaffold_86_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20678..21742)
DNA (1065bp) protein (355aa)
Sporulation integral membrane protein YtvI n=4 Tax=Clostridium perfringens RepID=B1RAV4_CLOPF
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EDT22635.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
sporulation integral membrane protein YtvI
66_004_scaffold_86_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21754..22914)
DNA (1161bp) protein (387aa)
Cysteine desulfurase family protein n=2 Tax=Clostridium perfringens RepID=B1BXH1_CLOPF
Cysteine desulfurase family protein {ECO:0000313|EMBL:EDT22642.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
nifS; cysteine desulfurase
66_004_scaffold_86_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22857..23573)
DNA (717bp) protein (239aa)
LysE family translocator protein n=9 Tax=Clostridium perfringens RepID=H7D004_CLOPF
LysE family translocator protein
Translocator protein, LysE family {ECO:0000313|EMBL:EDT13599.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_86_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23733..23966
DNA (234bp) protein (78aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D003_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13618.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_86_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23999..24859
DNA (861bp) protein (287aa)
Mechanosensitive ion channel family protein n=7 Tax=Clostridium perfringens RepID=Q0TM06_CLOP1
mechanosensitive ion channel family protein; K03442 small conductance mechanosensitive channel
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EDT13617.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_86_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24896..25108
DNA (213bp) protein (71aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7D001_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82349.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_86_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25252..25539
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=11 Tax=Clostridium perfringens RepID=RS6_CLOP1
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_86_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25553..26005
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=10 Tax=Clostridium perfringens RepID=SSB_CLOPE
ssb; single-strand binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_86_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26036..26278
DNA (243bp) protein (81aa)
30S ribosomal protein S18 n=11 Tax=Clostridium perfringens RepID=RS18_CLOP1
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_86_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26561..26878
DNA (318bp) protein (106aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZZ7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13480.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_86_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26896..27891
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZZ6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15771.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying items 1-30 of 48 in total

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