ggKbase home page

66_004_scaffold_95

Search features with annotation key words

Displaying items 1-30 of 34 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_95_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

501..1136
DNA (636bp) protein (212aa)
HAD family hydrolase n=2 Tax=Clostridium perfringens RepID=H7CS40_CLOPF
HAD family hydrolase {ECO:0000313|EMBL:EIA18529.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
HAD family hydrolase
66_004_scaffold_95_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1146..1484
DNA (339bp) protein (113aa)
Putative membrane protein n=7 Tax=Clostridium perfringens RepID=Q0TUJ2_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS81644.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_004_scaffold_95_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1477..1809
DNA (333bp) protein (111aa)
Putative membrane protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRQ2_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDS80837.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_004_scaffold_95_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1953..3431
DNA (1479bp) protein (493aa)
Putative uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H1CWH9_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT26644.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_95_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3424..4311
DNA (888bp) protein (296aa)
Prenyltransferase, UbiA family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUH7_CLOPF
Prenyltransferase, UbiA family {ECO:0000313|EMBL:EDT14636.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
66_004_scaffold_95_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4356..5048)
DNA (693bp) protein (231aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CS34_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18523.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_004_scaffold_95_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5051..6481)
DNA (1431bp) protein (477aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUJ7_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18522.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_95_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6899..7675)
DNA (777bp) protein (259aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XNU3_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79945.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_95_trna_1
unknown

Not on your lists

7848..7920
DNA (73bp)
transferRNA Met
66_004_scaffold_95_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8048..8575)
DNA (528bp) protein (176aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS31_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT14626.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_95_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8828..10027)
DNA (1200bp) protein (400aa)
Transporter, monovalent cation:proton antiporter-2 (CPA2) family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUH2_CLOPF
Transporter, monovalent cation:proton antiporter-2 (CPA2) family {ECO:0000313|EMBL:EDT14683.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
monovalent cation:proton antiporter-2 (CPA2) family protein
66_004_scaffold_95_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10319..10990
DNA (672bp) protein (224aa)
DNA-binding response regulator n=1 Tax=Clostridium perfringens F262 RepID=H7CS29_CLOPF
DNA-binding response regulator {ECO:0000313|EMBL:EIA18518.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
DNA-binding response regulator
66_004_scaffold_95_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10980..12410
DNA (1431bp) protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Two-component sensor histidine kinase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNU7_CLOPE
sensor histidine kinase
66_004_scaffold_95_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12403..13191
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHG9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26612.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_95_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13172..14191
DNA (1020bp) protein (340aa)
Putative iron compound ABC transporter, iron compound-binding protein n=4 Tax=Clostridium perfringens RepID=H7CS26_CLOPF
Putative iron compound ABC transporter, iron compound-binding protein {ECO:0000313|EMBL:EDT14658.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
iron compound ABC transporter iron compound-binding protein
66_004_scaffold_95_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14383..15720
DNA (1338bp) protein (446aa)
Glycerol-3-phosphate transporter n=3 Tax=Clostridium perfringens RepID=Q8XNV0_CLOPE
glpT; glycerol-3-phosphate transporter; K02445 MFS transporter, OPA family, glycerol-3-phosphate transporter
Putative glycerol-3-phosphate transporter {ECO:0000313|EMBL:EDT14668.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_95_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15878..17323)
DNA (1446bp) protein (482aa)
Sulfatase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRR5_CLOPF
Sulfatase family protein {ECO:0000313|EMBL:EDT72017.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
arylsulfatase
66_004_scaffold_95_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17638..17823)
DNA (186bp) protein (62aa)
Iron-sulfur cluster-binding protein n=7 Tax=Clostridium perfringens RepID=Q0SWE4_CLOPS
iron-sulfur cluster-binding protein
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDT26642.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_95_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17950..18255)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRR7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87450.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_004_scaffold_95_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18230..18625)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2G3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT71975.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein; K09790 hypothetical protein
66_004_scaffold_95_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18612..20300)
DNA (1689bp) protein (563aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R898_CLOPF
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDT23533.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
ABC transporter; K06148 ATP-binding cassette, subfamily C, bacterial
66_004_scaffold_95_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20301..22076)
DNA (1776bp) protein (592aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUG1_CLOPF
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EDT14638.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
multidrug resistance protein 1
66_004_scaffold_95_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22070..22849)
DNA (780bp) protein (260aa)
fhuC; ferrichrome ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH67_CLOPF
Iron chelate uptake ABC transporter, FeCT family, ATP-binding protein {ECO:0000313|EMBL:EDS80864.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_004_scaffold_95_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22850..23836)
DNA (987bp) protein (329aa)
Iron chelate ABC transporter permease protein n=5 Tax=Clostridium perfringens RepID=H7CS17_CLOPF
Iron chelate ABC transporter permease protein {ECO:0000313|EMBL:EIA18506.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
putative ferrichrome ABC transporter permease; K02015 iron complex transport system permease protein
66_004_scaffold_95_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23823..24710)
DNA (888bp) protein (296aa)
Putative iron chelate uptake ABC transporter, solute-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH65_CLOPF
Putative iron chelate uptake ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS80843.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
putative ferrichrome ABC transporter periplasmic-binding protein; K02016 iron complex transport system substrate-binding protein
66_004_scaffold_95_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24724..25287)
DNA (564bp) protein (188aa)
sortase; K07284 sortase A [EC:3.4.22.70]
Sortase family protein n=4 Tax=Clostridium perfringens RepID=H7CS15_CLOPF
Sortase family protein {ECO:0000313|EMBL:EDT14674.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_95_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25289..25936)
DNA (648bp) protein (216aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XNW1_CLOPE
iron transporter
Uncharacterized protein {ECO:0000313|EMBL:BAB79927.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_95_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25998..28286)
DNA (2289bp) protein (763aa)
Cell wall anchor domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2F5_CLOPF
Cell wall anchor domain protein {ECO:0000313|EMBL:EDT71965.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
66_004_scaffold_95_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28373..29131
DNA (759bp) protein (253aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R8A6_CLOPF
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDT23552.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
AraC family transcriptional regulator
66_004_scaffold_95_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29178..30374)
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ackA; acetate kinase (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase n=3 Tax=Clostridium perfringens RepID=B1BH60_CLOPF
Displaying items 1-30 of 34 in total

View Taxonomy