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66_004_scaffold_104

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_104_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..326)
DNA (324bp) protein (108aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CSJ6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80113.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_104_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(626..2017)
DNA (1392bp) protein (464aa)
Berberine family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TU25_CLOP1
reticuline oxidase
Berberine family protein {ECO:0000313|EMBL:EDT72646.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_004_scaffold_104_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2104..2976)
DNA (873bp) protein (291aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CSJ4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80111.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_104_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3232..4569)
DNA (1338bp) protein (446aa)
Branched-chain amino acid transporter n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XND4_CLOPE
brnQ; branched chain amino acid ABC transporter carrier protein; K03311 branched-chain amino acid:cation transporter, LIVCS family
Branched-chain amino acid transporter {ECO:0000313|EMBL:BAB80110.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_104_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5303..5839)
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XND5_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80109.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_104_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6047..6658)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V0U6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT72582.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
66_004_scaffold_104_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6671..6988)
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CSJ0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18365.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_004_scaffold_104_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7213..7854)
DNA (642bp) protein (214aa)
Cyclic nucleotide-binding protein n=6 Tax=Clostridium perfringens RepID=H7CSI9_CLOPF
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EIA18364.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_104_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7888..8565)
DNA (678bp) protein (226aa)
Transporter n=6 Tax=Clostridium perfringens RepID=H7CSI8_CLOPF
transporter; K03811 nicotinamide mononucleotide transporter
Putative nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EDT16644.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_104_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8655..9473)
DNA (819bp) protein (273aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
purine nucleoside phosphorylase (EC:2.4.2.1); K03783 purine-nucleoside phosphorylase [EC:2.4.2.1]
Purine nucleoside phosphorylase n=1 Tax=Clostridium perfringens F262 RepID=H7CSI7_CLOPF
66_004_scaffold_104_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10147..11505
DNA (1359bp) protein (453aa)
Uracil-xanthine permease n=4 Tax=Clostridium perfringens RepID=Q0TU48_CLOP1
uracil-xanthine permease; K03458 nucleobase:cation symporter-2, NCS2 family
Uracil-xanthine permease {ECO:0000313|EMBL:EDT24949.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_104_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11823..12662)
DNA (840bp) protein (280aa)
nadC; nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19); K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Clostridium perfringens F262 RepID=H7CSI5_CLOPF
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EIA18360.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_104_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12619..13938)
DNA (1320bp) protein (440aa)
nadB; L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16]
L-aspartate oxidase {ECO:0000313|EMBL:EDT72578.1}; EC=1.4.3.16 {ECO:0000313|EMBL:EDT72578.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L-aspartate oxidase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V0V3_CLOPF
66_004_scaffold_104_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13943..14848)
DNA (906bp) protein (302aa)
nadA; quinolinate synthetase; K03517 quinolinate synthase [EC:2.5.1.72]
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Quinolinate synthase A n=6 Tax=Clostridium perfringens RepID=NADA_CLOPE
66_004_scaffold_104_15
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15192..15689
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=D6MET8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AKA67471.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
66_004_scaffold_104_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15935..16798)
DNA (864bp) protein (288aa)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EDT24973.1}; EC=1.1.1.60 {ECO:0000313|EMBL:EDT24973.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
garR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60); K00042 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
2-hydroxy-3-oxopropionate reductase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R493_CLOPF
66_004_scaffold_104_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16894..17046)
DNA (153bp) protein (51aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q0SVZ6_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87802.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_004_scaffold_104_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17171..18004)
DNA (834bp) protein (278aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNZ4_CLOPF
phosphoesterase; K07098
Probable phosphoesterase {ECO:0000313|EMBL:BAB80097.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_104_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18472..19434
DNA (963bp) protein (321aa)
histidine decarboxylase, pyruvoyl type (EC:4.1.1.22); K01590 histidine decarboxylase [EC:4.1.1.22]
Histidine decarboxylase, pyruvoyl type {ECO:0000313|EMBL:EDT16666.1}; EC=4.1.1.22 {ECO:0000313|EMBL:EDT16666.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Histidine decarboxylase proenzyme n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUE6_CLOPF
66_004_scaffold_104_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19480..20925
DNA (1446bp) protein (482aa)
Putative amino-acid transporter CPF_0377 n=8 Tax=Clostridium perfringens RepID=Y377_CLOP1
arginine/ornithine antiporter; K03758 arginine:ornithine antiporter
Putative amino-acid transporter CPE0389; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_104_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21890..22372
DNA (483bp) protein (161aa)
AsnC family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CTG1_CLOPF
AsnC family transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB80416.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_104_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22369..23547
DNA (1179bp) protein (393aa)
aspC; aspartate aminotransferase; K10907 aminotransferase [EC:2.6.1.-]
Aminotransferase, class I/II n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BP67_CLOPF
Aminotransferase, class I/II {ECO:0000313|EMBL:EDT16388.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_104_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23620..24687
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RQN0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS79499.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_004_scaffold_104_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24744..25217)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT79_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16406.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_104_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25267..26409)
DNA (1143bp) protein (381aa)
Putative monogalactosyldiacylglycerol synthase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQM8_CLOPF
monogalactosyldiacylglycerol synthase
Putative monogalactosyldiacylglycerol synthase {ECO:0000313|EMBL:EDT26830.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_104_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26900..27403
DNA (504bp) protein (168aa)
GNAT family acetyltransferase n=2 Tax=Clostridium perfringens RepID=H7CTG6_CLOPF
GNAT family acetyltransferase {ECO:0000313|EMBL:EIA17968.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
GNAT family acetyltransferase
66_004_scaffold_104_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27625..28143
DNA (519bp) protein (173aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6H1_CLOPF
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EDT24106.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
sigW; RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
66_004_scaffold_104_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28219..29631
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQM5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT24109.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
66_004_scaffold_104_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29852..31054
DNA (1203bp) protein (401aa)
DHHA1 domain protein n=3 Tax=Clostridium perfringens RepID=Q0TT74_CLOP1
DHH domain-containing protein; K07050
DHHA1 domain protein {ECO:0000313|EMBL:EDT26391.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_104_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31109..32113
DNA (1005bp) protein (335aa)
glycosyl transferase family protein (EC:2.4.1.-); K00754 [EC:2.4.1.-]
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EDT26353.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDT26353.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Glycosyl transferase, group 2 family protein n=5 Tax=Clostridium perfringens RepID=H7CTH0_CLOPF
Displaying items 1-30 of 31 in total

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