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66_004_scaffold_124

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_004_scaffold_124_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(109..1857)
DNA (1749bp) protein (583aa)
dihydroxyacetone kinase; K00863 dihydroxyacetone kinase [EC:2.7.1.29]
Dihydroxyacetone kinase family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RAT5_CLOPF
Dihydroxyacetone kinase family protein {ECO:0000313|EMBL:EDT22657.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_004_scaffold_124_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1883..3013)
DNA (1131bp) protein (377aa)
gldA; glycerol dehydrogenase (EC:1.1.1.6); K00005 glycerol dehydrogenase [EC:1.1.1.6]
Glycerol dehydrogenase {ECO:0000313|EMBL:EDT13627.1}; EC=1.1.1.6 {ECO:0000313|EMBL:EDT13627.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Glycerol dehydrogenase n=9 Tax=Clostridium perfringens RepID=H7CRP6_CLOPF
66_004_scaffold_124_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3633..3941
DNA (309bp) protein (103aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CRP5_CLOPF
hypothetical protein; K09004 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13647.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_124_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4188..5450)
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWB1_CLOPF
PTS system sugar-specific permease component family protein {ECO:0000313|EMBL:AIY82901.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
sugar-specific permease SgaT/UlaA; K03475 PTS system, ascorbate-specific IIC component
66_004_scaffold_124_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5582..5866)
DNA (285bp) protein (95aa)
PTS system lactose/cellobiose-specific transporter subunit IIB; K02822 PTS system, ascorbate-specific IIB component [EC:2.7.1.69]
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWB2_CLOPF
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:AIY83621.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
66_004_scaffold_124_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5905..6360)
DNA (456bp) protein (152aa)
phosphotransferase system mannitol/fructose-specific IIA domain; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69]
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWB3_CLOPF
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein {ECO:0000313|EMBL:AIY83713.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
66_004_scaffold_124_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6568..8703)
DNA (2136bp) protein (712aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CWB4_CLOPF
PRD domain protein {ECO:0000313|EMBL:AIY84143.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
transcriptional antiterminator
66_004_scaffold_124_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9163..10299)
DNA (1137bp) protein (379aa)
acdS; acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-]
Acyl-CoA dehydrogenase n=7 Tax=Clostridium perfringens RepID=Q8XP68_CLOPE
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAB79803.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_004_scaffold_124_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10403..11953)
DNA (1551bp) protein (517aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
propionate CoA-transferase (EC:2.8.3.1); K01026 propionate CoA-transferase [EC:2.8.3.1]
Acetate CoA-transferase YdiF n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V4I0_CLOPF
66_004_scaffold_124_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12056..12853)
DNA (798bp) protein (266aa)
crotonase; K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:EDT13631.1}; EC=4.2.1.55 {ECO:0000313|EMBL:EDT13631.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Crotonase n=5 Tax=Clostridium perfringens RepID=Q8XP70_CLOPE
66_004_scaffold_124_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13063..13821)
DNA (759bp) protein (253aa)
Formate/nitrite transporter family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXD9_CLOPF
Formate/nitrite transporter family protein {ECO:0000313|EMBL:EDT13641.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
formate/nitrite transporter family protein
66_004_scaffold_124_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14446..15234)
DNA (789bp) protein (263aa)
Gfo/Idh/MocA family oxidoreductase; K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
Oxidoreductase, Gfo/Idh/MocA family n=4 Tax=Clostridium perfringens RepID=Q0TUY8_CLOP1
Gfo/Idh/MocA family oxidoreductase {ECO:0000313|EMBL:EIA18672.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_124_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15322..16911)
DNA (1590bp) protein (530aa)
Sodium/solute symporter family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXE1_CLOPF
symporter YidK; K03307 solute:Na+ symporter, SSS family
Sodium/solute symporter family protein {ECO:0000313|EMBL:EDT13625.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_124_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17196..17885)
DNA (690bp) protein (230aa)
Inosose dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; EC=4.2.1.44 {ECO:0000256|HAMAP-Rule:MF_01672};; 2-keto-myo-inositol dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
iolE; myo-inositol catabolism protein; K03335 inosose dehydratase [EC:4.2.1.44]
Inosose dehydratase n=5 Tax=Clostridium perfringens RepID=H7CRN8_CLOPF
66_004_scaffold_124_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18004..19005)
DNA (1002bp) protein (334aa)
dehydrogenase; K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
Myo-inositol 2-dehydrogenase n=9 Tax=Clostridium perfringens RepID=Q0TUZ1_CLOP1
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:EIA18669.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_124_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19081..21000)
DNA (1920bp) protein (640aa)
iolD; myo-inositol catabolism protein IolD; K03336 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [EC:3.7.1.-]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000255|HAMAP-Rule:MF_01669}; Short=THcHDO hydrolase {ECO:0000255|HAMAP-Rule:MF_01669};; EC=3.7.1.22 {ECO:0000255|HAMAP-Rule:MF_01669};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=2 Tax=Clostridium perfringens RepID=IOLD_CLOP1
66_004_scaffold_124_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21017..21784)
DNA (768bp) protein (256aa)
iolB; myo-inositol catabolism protein; K03337 5-deoxy-glucuronate isomerase [EC:5.3.1.-]
Myo-inositol catabolism protein n=8 Tax=Clostridium perfringens RepID=H7CRN5_CLOPF
Myo-inositol catabolism protein {ECO:0000313|EMBL:EIA18667.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_004_scaffold_124_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21798..22814)
DNA (1017bp) protein (339aa)
myo-inositol catabolism protein IolC; K03338 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
5-dehydro-2-deoxygluconokinase {ECO:0000256|HAMAP-Rule:MF_01668}; EC=2.7.1.92 {ECO:0000256|HAMAP-Rule:MF_01668};; 2-deoxy-5-keto-D-gluconate kinase {ECO:0000256|HAMAP-Rule:MF_01668}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
5-dehydro-2-deoxygluconokinase n=7 Tax=Clostridium perfringens RepID=IOLC_CLOP1
66_004_scaffold_124_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22828..23673)
DNA (846bp) protein (282aa)
alf1; fructose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:EIA18665.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EIA18665.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Fructose-bisphosphate aldolase n=5 Tax=Clostridium perfringens RepID=H7CRN3_CLOPF
66_004_scaffold_124_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23680..24834)
DNA (1155bp) protein (385aa)
Alcohol dehydrogenase, iron-containing n=7 Tax=Clostridium perfringens RepID=Q0TUZ6_CLOP1
alcohol dehydrogenase
Alcohol dehydrogenase, iron-containing {ECO:0000313|EMBL:EDT71252.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_004_scaffold_124_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25316..26086
DNA (771bp) protein (257aa)
Transcription repressor of myo-inositol catabolism operon n=7 Tax=Clostridium perfringens RepID=Q8XP81_CLOPE
iolR; transcription repressor of myo-inositol catabolism operon; K06608 DeoR family transcriptional regulator, myo-inositol catabolism operon repressor
Putative transcriptional regulator IolR {ECO:0000313|EMBL:EDT13636.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_004_scaffold_124_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26445..27068)
DNA (624bp) protein (208aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase family protein n=5 Tax=Clostridium perfringens RepID=Q0TUZ8_CLOP1
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EDT25721.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_004_scaffold_124_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27401..27553)
DNA (153bp) protein (51aa)
Rubredoxin/rubrerythrin n=4 Tax=Clostridium perfringens RepID=H7CRM9_CLOPF
rubredoxin/rubrerythrin
Uncharacterized protein {ECO:0000313|EMBL:EIA15752.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 23 items

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