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66_006_scaffold_111

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_111_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1009..1200)
DNA (192bp) protein (64aa)
Transposase {ECO:0000313|EMBL:CEP96049.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
66_006_scaffold_111_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1155..1556)
DNA (402bp) protein (134aa)
Transposase n=2 Tax=Clostridium botulinum RepID=C3KV53_CLOB6
Transposase {ECO:0000313|EMBL:CEN22304.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
transposase
66_006_scaffold_111_3
unknown

Not on your lists

comp(1797..1886)
DNA (90bp) protein (30aa)

This feature has no annotations

66_006_scaffold_111_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2848..6093)
DNA (3246bp) protein (1082aa)
LRR adjacent family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V638_CLOPF
LRR adjacent family {ECO:0000313|EMBL:EDT70726.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
putative enhancing factor (viral)
66_006_scaffold_111_5
unknown

Not on your lists

comp(8118..8255)
DNA (138bp) protein (46aa)

This feature has no annotations

66_006_scaffold_111_6
unknown

Not on your lists

comp(8941..9480)
DNA (540bp) protein (180aa)
hypothetical protein
66_006_scaffold_111_7
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9516..10178)
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Bacillus cereus group RepID=C3EDY0_BACTU
Uncharacterized protein {ECO:0000313|EMBL:KGJ49813.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
hypothetical protein
66_006_scaffold_111_8
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10169..10969)
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VI04_9FIRM
Predicted transmembrane sensor domain {ECO:0000313|EMBL:CEN94713.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
66_006_scaffold_111_9
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11203..12921)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=2 Tax=Staphylococcus hominis RepID=H3VLP4_STAHO
PF13910 domain protein {ECO:0000313|EMBL:KDP52938.1}; TaxID=904802 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus subsp. aureus CO-98.;"
hypothetical protein
66_006_scaffold_111_10
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13285..14391)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Listeria monocytogenes RepID=D2P337_LISM1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD70929.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
66_006_scaffold_111_11
Pontibacillus litoralis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14459..15967)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DEP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGX85890.1}; TaxID=1385512 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus litoralis JSM 072002.;"
hypothetical protein
66_006_scaffold_111_12
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15960..17411)
DNA (1452bp) protein (484aa)
Tn7-like transposition protein C n=1 Tax=Clostridium sp. DL-VIII RepID=G7M979_9CLOT
Tn7-like transposition protein C {ECO:0000313|EMBL:EHJ01946.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Tn7-like transposition protein C
66_006_scaffold_111_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17404..18117)
DNA (714bp) protein (238aa)
HMG-I and HMG-Y, DNA-binding n=1 Tax=Clostridium sp. DL-VIII RepID=G7M980_9CLOT
HMG-I and HMG-Y, DNA-binding {ECO:0000313|EMBL:EHJ01947.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Mu transposase, C-terminal
66_006_scaffold_111_14
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18127..18831)
DNA (705bp) protein (235aa)
HMG-I and HMG-Y, DNA-binding n=1 Tax=Clostridium sp. DL-VIII RepID=G7M980_9CLOT
HMG-I and HMG-Y, DNA-binding {ECO:0000313|EMBL:EHJ01947.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
HMG-I and HMG-Y, DNA-binding
66_006_scaffold_111_15
unknown

Not on your lists

comp(19084..19416)
DNA (333bp) protein (111aa)

This feature has no annotations

66_006_scaffold_111_16
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19437..19931)
DNA (495bp) protein (165aa)
TnsA endonuclease n=1 Tax=Clostridium sp. DL-VIII RepID=G7M981_9CLOT
TnsA endonuclease {ECO:0000313|EMBL:EHJ01948.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
TnsA endonuclease
66_006_scaffold_111_17
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20277..20843)
DNA (567bp) protein (189aa)
Resolvase domain containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7LXB3_9CLOT
Resolvase domain containing protein {ECO:0000313|EMBL:CDM68422.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
resolvase
66_006_scaffold_111_18
unknown

Not on your lists

comp(21063..21347)
DNA (285bp) protein (95aa)

This feature has no annotations

66_006_scaffold_111_19
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21516..22022)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RU46_SYNP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY61450.1}; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
66_006_scaffold_111_20
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(22041..22355)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RU46_SYNP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY61450.1}; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
66_006_scaffold_111_21

Not on your lists

comp(22471..23073)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C6X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ37174.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
66_006_scaffold_111_22
unknown

Not on your lists

comp(23131..23736)
DNA (606bp) protein (202aa)

This feature has no annotations

66_006_scaffold_111_23
unknown

Not on your lists

comp(23821..24336)
DNA (516bp) protein (172aa)

This feature has no annotations

66_006_scaffold_111_24
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24490..25767)
DNA (1278bp) protein (426aa)
Exodeoxyribonuclease V {ECO:0000313|EMBL:EHJ01960.1}; EC=3.1.11.5 {ECO:0000313|EMBL:EHJ01960.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
exodeoxyribonuclease V (EC:3.1.11.5)
Exodeoxyribonuclease V n=1 Tax=Clostridium sp. DL-VIII RepID=G7M993_9CLOT
66_006_scaffold_111_25
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26029..26613)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTM4_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43915.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
66_006_scaffold_111_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26685..27134)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M994_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ01961.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Displaying 26 items

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