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66_006_scaffold_196

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_196_1
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1001..3739
DNA (2739bp) protein (913aa)
Uncharacterized protein n=1 Tax=Enterococcus faecalis D32 RepID=I7BVH1_ENTFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO44796.1}; TaxID=1206105 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis D32.;"
66_006_scaffold_196_2
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3789..4439
DNA (651bp) protein (217aa)
Bacterial sugar transferase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSC9_CLOBI
Bacterial sugar transferase family protein {ECO:0000313|EMBL:EQK43661.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
UDP-galactose phosphate transferase
66_006_scaffold_196_3
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4603..5226
DNA (624bp) protein (208aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VRD2_CLOBI
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family protein {ECO:0000313|EMBL:EQK43660.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
hypothetical protein
66_006_scaffold_196_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5326..6468
DNA (1143bp) protein (381aa)
Spore coat polysaccharide biosynthesis protein {ECO:0000313|EMBL:CEN21623.1}; EC=2.6.1.87 {ECO:0000313|EMBL:CEN21623.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VIY1_CLOBI
spore coat polysaccharide biosynthesis protein
66_006_scaffold_196_5
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6471..7634
DNA (1164bp) protein (388aa)
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:CEO33560.1}; EC=2.4.1.21 {ECO:0000313|EMBL:CEO33560.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Uncharacterized protein n=1 Tax=Staphylococcus simulans UMC-CNS-990 PF93_STASI">RepID=U7PF93_STASI
putative capsular polysaccharide biosynthesis protein
66_006_scaffold_196_6
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7634..8959
DNA (1326bp) protein (442aa)
Protein CapL {ECO:0000313|EMBL:CEN91442.1}; EC=1.1.1.132 {ECO:0000313|EMBL:CEN91442.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
nucleotide sugar dehydrogenase (EC:1.1.1.22); K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-]
Nucleotide sugar dehydrogenase family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0D1G7_CLOSO
66_006_scaffold_196_7
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8962..9936
DNA (975bp) protein (325aa)
Protein CapI {ECO:0000313|EMBL:CEO33562.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CEO33562.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Polysaccharide biosynthesis family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VIX6_CLOBI
NAD dependent epimerase
66_006_scaffold_196_8
Clostridium sp. CAG:567, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9954..11375
DNA (1422bp) protein (474aa)
Capsular polysaccharide biosynthesis protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TSN1_CLOP1
capsular polysaccharide biosynthesis protein
UDP-N-acetylglucosamine 4 6-dehydratase {ECO:0000313|EMBL:CDE97223.1}; TaxID=1262820 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:567.;"
66_006_scaffold_196_9
Fusobacterium sp. CM21, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

11392..12489
DNA (1098bp) protein (366aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:ETT12283.1}; EC=2.4.-.- {ECO:0000313|EMBL:ETT12283.1};; TaxID=936562 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium sp. CM21.;"
Glycosyl transferase n=1 Tax=Geobacillus sp. A8 RepID=T0NMH4_9BACI
glycosyl transferase family protein
66_006_scaffold_196_10
unknown

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12507..13013
DNA (507bp) protein (169aa)

This feature has no annotations

66_006_scaffold_196_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13020..13727
DNA (708bp) protein (236aa)
Capsule chain length determinant protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTW9_CLOP1
capsule chain length determinant protein
Capsular polysaccharide biosynthsis protein {ECO:0000313|EMBL:BAB80197.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_196_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13728..14426
DNA (699bp) protein (233aa)
capsular exopolysaccharide family (EC:2.7.10.2)
Putative Capsular exopolysaccharide family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EXD3_9CLOT
Putative Capsular exopolysaccharide family {ECO:0000313|EMBL:CDG00881.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
66_006_scaffold_196_13
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14513..14956
DNA (444bp) protein (148aa)
Protein CapG id=4955709 bin=GWC2_Planctomycete_KSU_39_26 species=Staphylococcus hominis genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Capsule biosynthesis protein CapG {ECO:0000313|EMBL:KIA89941.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
acetyltransferase (isoleucine patch superfamily)-like protein
66_006_scaffold_196_14
Yersinia enterocolitica, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14938..16029
DNA (1092bp) protein (364aa)
Uncharacterized protein n=10 Tax=Yersinia enterocolitica RepID=E7B1Z9_YERE1
hypothetical protein
WbcM protein {ECO:0000313|EMBL:CAA87701.1}; TaxID=630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia enterocolitica.;"
66_006_scaffold_196_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16035..17204
DNA (1170bp) protein (390aa)
O-antigen polymerase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ABK6_THEID
O-antigen polymerase
Polysaccharide deacetylase {ECO:0000313|EMBL:EMA43814.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
66_006_scaffold_196_16
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

17201..17683
DNA (483bp) protein (161aa)
Polysaccharide biosynthesis protein n=1 Tax=Fusobacterium nucleatum subsp. animalis D11 RepID=D6BIX4_FUSNU
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFD82121.2}; TaxID=556264 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. animalis D11.;"
hypothetical protein
Displaying 16 items

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