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66_006_scaffold_220

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_220_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..202
DNA (201bp) protein (67aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RT92_CLOPF
Membrane protein, putative {ECO:0000313|EMBL:EDT25888.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_006_scaffold_220_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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229..1053
DNA (825bp) protein (275aa)
LicD family protein; K07271 lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
LicD-related protein n=2 Tax=Clostridium perfringens RepID=B1V3X7_CLOPF
Putative lipopolysaccharide biosynthsis protein {ECO:0000313|EMBL:EIA17864.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_220_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1113..2564
DNA (1452bp) protein (484aa)
Polysaccharide biosynthesis protein n=2 Tax=Clostridium perfringens RepID=B1BF15_CLOPF
capsular polysaccharide synthesis protein
Probable capsular polysaccharide synthesis protein {ECO:0000313|EMBL:BAB80329.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_220_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2586..4010
DNA (1425bp) protein (475aa)
Cell wall binding repeat protein/mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BF16_CLOPF
Cell wall binding repeat protein/mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain {ECO:0000313|EMBL:EDS81628.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
66_006_scaffold_220_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4359..4769
DNA (411bp) protein (137aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain-containing protein n=1 Tax=Clostridium perfringens F262 RepID=H7CT64_CLOPF
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain-containing protein {ECO:0000313|EMBL:EIA17866.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_006_scaffold_220_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4801..6426
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CT65_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17867.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_006_scaffold_220_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6671..7351
DNA (681bp) protein (227aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Cell wall binding repeat protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3Y0_CLOPF
Cell wall binding repeat protein {ECO:0000313|EMBL:EDT25875.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_006_scaffold_220_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7425..9254
DNA (1830bp) protein (610aa)
Cell wall binding repeat protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3Y0_CLOPF
Cell wall binding repeat protein {ECO:0000313|EMBL:EDT71484.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
66_006_scaffold_220_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9459..11327
DNA (1869bp) protein (623aa)
Transcriptional regulator, MarR family/choline/ethanolamine kinase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RJI5_CLOPF
Transcriptional regulator, MarR family/choline/ethanolamine kinase {ECO:0000313|EMBL:EDT25864.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
licA; choline kinase
66_006_scaffold_220_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11353..12321
DNA (969bp) protein (323aa)
Lic-1 operon protein n=2 Tax=Clostridium perfringens RepID=H7CT68_CLOPF
licB; lic-1 operon protein
Lic-1 operon protein {ECO:0000313|EMBL:EIA17870.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_220_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12468..13151
DNA (684bp) protein (228aa)
Nucleotidyl transferase family protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RT99_CLOPF
licC protein
Nucleotidyl transferase family protein {ECO:0000313|EMBL:ABG86407.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_220_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13270..14628)
DNA (1359bp) protein (453aa)
Cell wall binding repeat protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTA0_CLOPF
Cell wall binding repeat protein {ECO:0000313|EMBL:EDT25880.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
66_006_scaffold_220_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14747..15766)
DNA (1020bp) protein (340aa)
Putative transcriptional regulator n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTH5_CLOP1
transcriptional regulator
Probable PBP5 synthesis regulator protein {ECO:0000313|EMBL:BAB80337.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_220_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16045..16170)
DNA (126bp) protein (42aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RTA2_CLOPF
brnQ; branched-chain amino acid transport system II carrier protein; K03311 branched-chain amino acid:cation transporter, LIVCS family
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EIA17874.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 14 items

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