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66_006_scaffold_112

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_112_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..421
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0TSU4_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24764.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_006_scaffold_112_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

369..761
DNA (393bp) protein (131aa)
Phage integrase family domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPL8_CLOPS
phage integrase family protein
Phage integrase family domain protein {ECO:0000313|EMBL:ABG87887.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_112_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1011..1457
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPL9_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87879.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_112_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1814..3163
DNA (1350bp) protein (450aa)
hypothetical protein n=1 Tax=Metascardovia criceti RepID=UPI00037CDCC0
Uncharacterized protein {ECO:0000313|EMBL:CEK35782.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
66_006_scaffold_112_5
unknown

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3269..3571
DNA (303bp) protein (101aa)

This feature has no annotations

66_006_scaffold_112_6
unknown

Not on your lists

comp(3623..3835)
DNA (213bp) protein (71aa)

This feature has no annotations

66_006_scaffold_112_7
unknown

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comp(3884..4057)
DNA (174bp) protein (58aa)

This feature has no annotations

66_006_scaffold_112_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4121..6469
DNA (2349bp) protein (783aa)
Lactococcin-G-processing and transport ATP-binding protein LagD {ECO:0000313|EMBL:EDT25476.1}; EC=3.4.22.- {ECO:0000313|EMBL:EDT25476.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Lactococcin-G-processing and transport ATP-binding protein LagD n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RKN7_CLOPF
bacteriocin ABC transporter ATP-binding/permease; K06147 ATP-binding cassette, subfamily B, bacterial
66_006_scaffold_112_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6459..7961
DNA (1503bp) protein (501aa)
Putative bacteriocin ABC transporter, bacteriocin-binding protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SU02_CLOPS
bacteriocin ABC transporter bacteriocin-binding protein
Putative bacteriocin ABC transporter, bacteriocin-binding protein {ECO:0000313|EMBL:ABG85975.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_112_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7991..8239
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SWD3_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85401.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_112_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8252..9019
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XNT8_CLOPE
CAAX amino terminal protease family protein; K07052
CAAX amino terminal protease family protein {ECO:0000313|EMBL:ABG87414.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_112_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9361..9861
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPL7_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87888.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_112_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10615..11592
DNA (978bp) protein (326aa)
Phage integrase family domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPL8_CLOPS
phage integrase family protein
Phage integrase family domain protein {ECO:0000313|EMBL:ABG87887.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_112_14
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11781..12926
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F9W1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AJG96774.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
66_006_scaffold_112_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13583..14023
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPL9_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87879.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_112_16
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14117..15196
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GMF5_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO36895.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
66_006_scaffold_112_17
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15361..16707
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Metascardovia criceti RepID=UPI00037CDCC0
Uncharacterized protein {ECO:0000313|EMBL:CEK36562.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
66_006_scaffold_112_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16935..19352
DNA (2418bp) protein (806aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C7R0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR25399.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
66_006_scaffold_112_19
unknown

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19528..19863
DNA (336bp) protein (112aa)

This feature has no annotations

66_006_scaffold_112_20
unknown

Not on your lists

19978..20100
DNA (123bp) protein (41aa)

This feature has no annotations

66_006_scaffold_112_21
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20127..20408
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium difficile E15 RepID=U3Y170_CLODI
XRE family transcriptional regulator {ECO:0000313|EMBL:CEQ26610.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
66_006_scaffold_112_22

Not on your lists

20791..21489
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KZ46_9FIRM
Uncultured bacterium plasmid pRGI00351 {ECO:0000313|EMBL:CDL65953.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
resolvase
66_006_scaffold_112_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21622..21771
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=B1V7W7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT70096.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
66_006_scaffold_112_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21878..22906)
DNA (1029bp) protein (343aa)
N-acetylmuramoyl-L-alanine amidase domain-containing protein (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V7W6_CLOPF
N-acetylmuramoyl-L-alanine amidase domain protein {ECO:0000313|EMBL:EDT70097.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_006_scaffold_112_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23146..23541
DNA (396bp) protein (132aa)
UviA protein-Clostridium perfringens plasmid pIP404 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPN2_CLOPS
uviA; uviA protein
UviA protein-Clostridium perfringens plasmid pIP404 {ECO:0000313|EMBL:ABG87874.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_112_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23753..23950
DNA (198bp) protein (66aa)
Bacteriocin-related protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPN1_CLOPS
bacteriocin-related protein
Bacteriocin-related protein {ECO:0000313|EMBL:ABG87870.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_112_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24087..26948
DNA (2862bp) protein (954aa)
Bacteriocin n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPN0_CLOPS
Bacteriocin {ECO:0000313|EMBL:ABG87873.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
bcn; bacteriocin
66_006_scaffold_112_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27099..27671
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3F4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13764.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Displaying 28 items

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