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66_006_scaffold_1

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Displaying items 1-30 of 553 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_1_1
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

257..2326
DNA (2070bp) protein (690aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
3' exoribonuclease; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KMI9_9FIRM
66_006_scaffold_1_2
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2337..2786
DNA (450bp) protein (150aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|SAAS:SAAS00071038}; EC=3.6.1.23 {ECO:0000256|SAAS:SAAS00071036};; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
dUTP pyrophosphatase; K01520 dUTP pyrophosphatase [EC:3.6.1.23]
DUTP diphosphatase n=3 Tax=Veillonella RepID=D1YM70_9FIRM
66_006_scaffold_1_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2933..4558
DNA (1626bp) protein (542aa)
UPI0003D671E9 related cluster n=2 Tax=unknown RepID=UPI0003D671E9
Methyltransferase type 12 {ECO:0000313|EMBL:ETI97461.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
methyltransferase type 12
66_006_scaffold_1_4
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4567..5100
DNA (534bp) protein (178aa)
NUDIX hydrolase; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13]
UPI0003D658FA related cluster n=1 Tax=unknown RepID=UPI0003D658FA
NUDIX hydrolase {ECO:0000313|EMBL:ETI97462.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
66_006_scaffold_1_5
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5231..6403
DNA (1173bp) protein (391aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
phosphopentomutase; K01839 phosphopentomutase [EC:5.4.2.7]
Phosphopentomutase n=3 Tax=Veillonella RepID=T0UDZ6_9FIRM
66_006_scaffold_1_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6607..7950
DNA (1344bp) protein (448aa)
Xanthine/uracil/vitamin C permease n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BM48_VEIPT
xanthine/uracil/vitamin C permease; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:ACZ24455.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
66_006_scaffold_1_7
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7964..9637
DNA (1674bp) protein (558aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2]
Adenine deaminase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KMJ6_9FIRM
66_006_scaffold_1_8
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9729..11933)
DNA (2205bp) protein (735aa)
2,3-cyclic nucleotide 3-phosphodiesterase n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KMJ7_9FIRM
2,3-cyclic nucleotide 3-phosphodiesterase {ECO:0000313|EMBL:EFG25324.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
metallophosphoesterase
66_006_scaffold_1_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(12079..12339)
DNA (261bp) protein (87aa)
30S ribosomal protein S20 n=4 Tax=Veillonella parvula RepID=D1BM51_VEIPT
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
66_006_scaffold_1_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12607..15228
DNA (2622bp) protein (874aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7]
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
DNA polymerase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BM52_VEIPT
66_006_scaffold_1_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15258..15860
DNA (603bp) protein (201aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
dephospho-CoA kinase; K00859 dephospho-CoA kinase [EC:2.7.1.24]
Dephospho-CoA kinase n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T2S7_9FIRM
66_006_scaffold_1_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16021..16575
DNA (555bp) protein (185aa)
lytic transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-]
Lytic transglycosylase catalytic n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BM54_VEIPT
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACZ24461.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
66_006_scaffold_1_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16559..17254
DNA (696bp) protein (232aa)
Uncharacterized protein n=4 Tax=Veillonella RepID=D1YM79_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EGL78069.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
hypothetical protein
66_006_scaffold_1_14
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17517..17975
DNA (459bp) protein (153aa)
Ribosome maturation factor RimP n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LDQ1_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral taxon 158 str. F0412.;"
hypothetical protein; K09748 ribosome maturation factor RimP
66_006_scaffold_1_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17993..19069
DNA (1077bp) protein (359aa)
Transcription termination factor NusA n=4 Tax=Veillonella RepID=D1YM81_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
NusA antitermination factor; K02600 N utilization substance protein A
66_006_scaffold_1_16
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19072..19341
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Veillonella parvula RepID=D1YM82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI97474.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein; K07742 hypothetical protein
66_006_scaffold_1_17
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19354..19659
DNA (306bp) protein (102aa)
Ribosomal protein L7Ae n=2 Tax=Veillonella RepID=C4FR86_9FIRM
ribosomal protein L7Ae/L30e/S12e/Gadd45
Ribosomal protein L7Ae {ECO:0000313|EMBL:EEP65429.1}; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar ATCC 17748.;"
66_006_scaffold_1_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19675..22146
DNA (2472bp) protein (824aa)
Translation initiation factor IF-2 n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BM60_VEIPT
translation initiation factor IF-2; K02519 translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
66_006_scaffold_1_19
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22156..22512
DNA (357bp) protein (119aa)
Ribosome-binding factor A n=3 Tax=Veillonella RepID=D1YM85_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ribosome-binding factor A; K02834 ribosome-binding factor A
66_006_scaffold_1_20
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22530..23471
DNA (942bp) protein (314aa)
DHHA1 domain protein n=4 Tax=Veillonella RepID=D1YM86_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:EFB86876.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein
66_006_scaffold_1_21
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23474..24415
DNA (942bp) protein (314aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B n=3 Tax=Veillonella RepID=D1YM87_9FIRM
66_006_scaffold_1_22
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24418..25350
DNA (933bp) protein (311aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
Riboflavin biosynthesis protein RibF n=4 Tax=Veillonella RepID=D1YM88_9FIRM
66_006_scaffold_1_23
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25363..26127
DNA (765bp) protein (255aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase n=4 Tax=Veillonella RepID=D1YM89_9FIRM
66_006_scaffold_1_24
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26127..28280
DNA (2154bp) protein (718aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
helicase, RecD/TraA family; K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Helicase RecD/TraA n=4 Tax=Veillonella RepID=D6KHF2_9FIRM
66_006_scaffold_1_25
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28280..28975
DNA (696bp) protein (232aa)
ComF family protein n=4 Tax=Veillonella RepID=D1YM91_9FIRM
ComF family protein {ECO:0000313|EMBL:EFB86881.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
amidophosphoribosyltransferase-like protein
66_006_scaffold_1_26
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29017..29619)
DNA (603bp) protein (201aa)
Metal dependent phosphohydrolase n=7 Tax=Veillonella RepID=D1BM68_VEIPT
metal dependent phosphohydrolase
HDIG domain protein {ECO:0000313|EMBL:EGL77762.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
66_006_scaffold_1_27
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29579..29731)
DNA (153bp) protein (51aa)
UPI0003D5C0CA related cluster n=1 Tax=unknown RepID=UPI0003D5C0CA
Uncharacterized protein {ECO:0000313|EMBL:ETI97485.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
66_006_scaffold_1_28
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30523..31329
DNA (807bp) protein (269aa)
UPI0003D65D6F related cluster n=1 Tax=unknown RepID=UPI0003D65D6F
family 3 extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ETI97486.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
66_006_scaffold_1_29
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31341..31997
DNA (657bp) protein (219aa)
Glutamate transport membrane-spanning protein n=4 Tax=Veillonella RepID=T0T2U4_9FIRM
Glutamine ABC transporter, permease protein {ECO:0000313|EMBL:EFG23553.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
polar amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein
66_006_scaffold_1_30
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31994..32719
DNA (726bp) protein (242aa)
ABC transporter related protein n=2 Tax=Veillonella parvula RepID=D1BM71_VEIPT
ABC transporter
Glutamate transport ATP-binding protein {ECO:0000313|EMBL:EQC65468.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
Displaying items 1-30 of 553 in total

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