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66_006_scaffold_116

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_116_1
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..561)
DNA (561bp) protein (187aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Yokenella regensburgei ATCC 43003 RepID=G9Z2J9_9ENTR
66_006_scaffold_116_2
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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624..2735
DNA (2112bp) protein (704aa)
Penicillin-binding protein activator LpoA n=2 Tax=Enterobacter sp. (strain 638) RepID=LPOA_ENT38
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
penicillin-binding protein activator LpoA
66_006_scaffold_116_3
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2693..3091
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Enterobacter cloacae RepID=UPI00031A020E
UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_006_scaffold_116_4
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3112..3702
DNA (591bp) protein (197aa)
DnaA initiator-associating protein DiaA n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TQ25_CITRI
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
diaA; DnaA initiator-associating factor for replication initiation ( phophosugar-binding protein); K12961 DnaA initiator-associating protein
66_006_scaffold_116_5
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3712..4287
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AQ35_CITK8
Uncharacterized protein {ECO:0000313|EMBL:GAL57668.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_006_scaffold_116_6
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4353..5393)
DNA (1041bp) protein (347aa)
Membrane protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VM23_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL57667.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
membrane protein
66_006_scaffold_116_7
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5469..6116)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TQ22_CITRI
Uncharacterized protein {ECO:0000313|EMBL:GAL57666.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_006_scaffold_116_8
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6240..6758
DNA (519bp) protein (173aa)
intracellular protease, PfpI family (EC:3.2.-.-)
Protein yhbO n=1 Tax=Enterobacter cloacae BWH 29 RepID=V3J7F9_ENTCL
Uncharacterized protein {ECO:0000313|EMBL:GAL57665.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_006_scaffold_116_9
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6744..7181)
DNA (438bp) protein (146aa)
UPF0306 protein HMPREF9086_4016 n=1 Tax=Enterobacter hormaechei ATCC 49162 RepID=F5S2F6_9ENTR
UPF0306 protein YhbP {ECO:0000256|HAMAP-Rule:MF_00764}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_006_scaffold_116_10
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7196..7537
DNA (342bp) protein (114aa)
UPF0213 protein H650_12260 n=1 Tax=Enterobacter sp. R4-368 RepID=R9VNL9_9ENTR
UPF0213 protein YhbQ {ECO:0000256|HAMAP-Rule:MF_01029}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_006_scaffold_116_11
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7524..8027)
DNA (504bp) protein (168aa)
yhbS; protein YhbS; K03824 putative acetyltransferase [EC:2.3.1.-]
N-acetyltransferase GCN5 n=1 Tax=Enterobacter sp. MGH 24 RepID=V3Q1T4_9ENTR
Putative N-acetyltransferase YhbS {ECO:0000313|EMBL:GAL57662.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_006_scaffold_116_12
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8021..8545)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. R4-368 RepID=R9VQT3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAL57661.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_006_scaffold_116_13
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8780..9775
DNA (996bp) protein (332aa)
peptidase U32; K08303 putative protease [EC:3.4.-.-]
Peptidase U32 n=1 Tax=Enterobacter sp. (strain 638) RepID=A4WEX3_ENT38
Putative protease YhbU {ECO:0000313|EMBL:GAL57660.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_006_scaffold_116_14
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9784..10659
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AQ45_CITK8
Uncharacterized protein {ECO:0000313|EMBL:GAL57659.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
hypothetical protein
66_006_scaffold_116_15
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10740..11747
DNA (1008bp) protein (336aa)
limB; Limonene 1,2-monooxygenase (EC:1.14.13.107)
Monooxygenase, luciferase family n=85 Tax=Escherichia RepID=D5D1G9_ECOKI
Uncharacterized protein {ECO:0000313|EMBL:GAL57658.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
66_006_scaffold_116_16
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11796..13040)
DNA (1245bp) protein (415aa)
Aromatic amino acid transport protein n=2 Tax=Enterobacter cloacae RepID=D6DMK1_ENTCL
Tryptophan transporter {ECO:0000313|EMBL:GAL57657.1}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
aromatic amino acid transport protein
66_006_scaffold_116_17
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13175..15106)
DNA (1932bp) protein (644aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
ATP-dependent RNA helicase DeaD n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2SCN3_ENTAL
66_006_scaffold_116_18
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15290..16174)
DNA (885bp) protein (295aa)
Lipoprotein NlpI n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0M1I1_ENTBF
lipoprotein NlpI, contains TPR repeats
Lipoprotein NlpI {ECO:0000256|PIRNR:PIRNR004654}; Flags: Precursor;; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
66_006_scaffold_116_19
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16287..18422)
DNA (2136bp) protein (712aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Klebsiella oxytoca M5al RepID=K6KFM3_KLEOX
66_006_scaffold_116_20
Cronobacter malonaticus, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18666..18935)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Cronobacter malonaticus 507 RepID=K8CQ80_9ENTR
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1208662 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter malonaticus 507.;"
66_006_scaffold_116_21
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19088..20035)
DNA (948bp) protein (316aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vu
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B n=1 Tax=Citrobacter sp. KTE32 RepID=R8V514_9ENTR
66_006_scaffold_116_22
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20035..20436)
DNA (402bp) protein (134aa)
Ribosome-binding factor A (Fragment) n=1 Tax=Salmonella enterica subsp. enterica serovar Adelaide str. A4-669 RepID=G5LEL7_SALET
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
rbfA; ribosome-binding factor A (P15B protein); K02834 ribosome-binding factor A
66_006_scaffold_116_23
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20519..23233)
DNA (2715bp) protein (905aa)
Translation initiation factor IF-2 n=2 Tax=Enterobacter cloacae RepID=IF2_ENTCL
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
bacterial translation initiation factor 2 (bIF-2)
66_006_scaffold_116_24
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23258..24745)
DNA (1488bp) protein (496aa)
Transcription termination factor NusA n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0LY68_ENTBF
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
transcription termination factor NusA
66_006_scaffold_116_25
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24774..25226)
DNA (453bp) protein (151aa)
Ribosome maturation factor RimP n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0LY89_ENTBF
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
66_006_scaffold_116_trna_1
unknown

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comp(25438..25511)
DNA (74bp)
transferRNA Met
66_006_scaffold_116_26
Escherichia vulneris, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25865..27055
DNA (1191bp) protein (397aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00581}; TaxID=1115515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia vulneris NBRC 102420.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Enterobacter sp. MGH 16 RepID=V3SMY0_9ENTR
Displaying 27 items

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