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66_006_scaffold_144

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_144_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..220
DNA (219bp) protein (73aa)
UPF0210 protein AC5_1865 n=2 Tax=Clostridium perfringens RepID=B1RGK9_CLOPF
hypothetical protein; K09157 hypothetical protein
UPF0210 protein HA1_09281 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_144_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(432..935)
DNA (504bp) protein (168aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CWM7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81204.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_144_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1260..2135)
DNA (876bp) protein (292aa)
Metallo-beta-lactamase family protein n=6 Tax=Clostridium perfringens RepID=H7CWM8_CLOPF
metallo-beta-lactamase; K02238 competence protein ComEC
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EIA16779.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_144_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2306..3628)
DNA (1323bp) protein (441aa)
Sensor histidine kinase VirS n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGJ0_CLOPF
Sensor histidine kinase VirS {ECO:0000313|EMBL:EDS81083.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
virS; sensor histidine kinase VirS
66_006_scaffold_144_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3622..4332)
DNA (711bp) protein (237aa)
LytTr family DNA-binding response regulator n=8 Tax=Clostridium perfringens RepID=H7CWM9_CLOPF
LytTr family DNA-binding response regulator
DNA-binding response regulator, LytTr family {ECO:0000313|EMBL:EDS81082.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_006_scaffold_144_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4471..5484)
DNA (1014bp) protein (338aa)
N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase domain-containing protein n=1 Tax=Clostridium perfringens F262 RepID=H7CWN0_CLOPF
N-acetylmuramoyl-L-alanine amidase domain-containing protein {ECO:0000313|EMBL:EIA16781.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_144_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5581..5868)
DNA (288bp) protein (96aa)
UPF0045 protein CPE1503 n=7 Tax=Clostridium perfringens RepID=Y1503_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16782.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_144_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6092..7105)
DNA (1014bp) protein (338aa)
3D/G5 domain-containing protein n=5 Tax=Clostridium perfringens RepID=H7CWN2_CLOPF
hypothetical protein
3D/G5 domain protein {ECO:0000313|EMBL:EDT26893.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_006_scaffold_144_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7531..8829)
DNA (1299bp) protein (433aa)
Uracil-xanthine permease n=3 Tax=Clostridium perfringens RepID=H1CR94_CLOPF
Putative uracil permease {ECO:0000313|EMBL:EDS80019.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
uracil transporter; K02824 uracil permease
66_006_scaffold_144_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9016..10599
DNA (1584bp) protein (528aa)
ABC transporter, ATP-binding protein n=6 Tax=Clostridium perfringens RepID=Q0TQ97_CLOP1
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT13950.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter ATP-binding protein
66_006_scaffold_144_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10650..11612)
DNA (963bp) protein (321aa)
Probable endo-1,4-beta-xylanase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XK96_CLOPE
endo-1,4-beta-xylanase
Probable endo-1,4-beta-xylanase {ECO:0000313|EMBL:BAB81213.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_144_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11995..14190)
DNA (2196bp) protein (732aa)
topB; DNA topoisomerase III (EC:5.99.1.2); K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
DNA topoisomerase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SSU9_CLOPS
66_006_scaffold_144_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14278..15696)
DNA (1419bp) protein (473aa)
Putative membrane protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJK0_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDS80020.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein; K08981 putative membrane protein
66_006_scaffold_144_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15706..16173)
DNA (468bp) protein (156aa)
Putative membrane protein n=5 Tax=Clostridium perfringens RepID=Q0SSU7_CLOPS
membrane flanked domain-containing protein; K09167 hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT26919.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_006_scaffold_144_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16588..16986)
DNA (399bp) protein (133aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XK92_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26896.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_006_scaffold_144_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17194..20520)
DNA (3327bp) protein (1109aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Two-component sensor histidine kinase/response regulator n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XK91_CLOPE
sensor histidine kinase/response regulator
66_006_scaffold_144_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20557..21657)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPX6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT24675.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
66_006_scaffold_144_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21672..21983)
DNA (312bp) protein (104aa)
Putative alginate biosynthesis protein AlgI n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJJ5_CLOPF
Putative alginate biosynthesis protein AlgI {ECO:0000313|EMBL:EDS80024.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
alginate biosynthesis protein AlgI
Displaying 18 items

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