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66_006_scaffold_192

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_192_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(457..813)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXA7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13668.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_006_scaffold_192_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(825..1130)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXA8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13660.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
66_006_scaffold_192_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1188..1490)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BES7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81722.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
66_006_scaffold_192_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1508..1837)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BES8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81692.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
66_006_scaffold_192_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2067..3293)
DNA (1227bp) protein (409aa)
TetA408 n=2 Tax=Clostridium perfringens RepID=B1BES9_CLOPF
TetA408(P) {ECO:0000313|EMBL:BAB71965.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
major facilitator superfamily
66_006_scaffold_192_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4029..4508)
DNA (480bp) protein (160aa)
rRNA large subunit methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000255|HAMAP-Rule:MF_00658}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai
Ribosomal RNA large subunit methyltransferase H 1 n=8 Tax=Clostridium perfringens RepID=RLMH1_CLOPS
66_006_scaffold_192_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4757..5128)
DNA (372bp) protein (124aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BET1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81681.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
66_006_scaffold_192_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5359..6000)
DNA (642bp) protein (214aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CZW1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24315.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_006_scaffold_192_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6107..6607)
DNA (501bp) protein (167aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=H7CZW2_CLOPF
hypothetical protein
SEC-C domain protein {ECO:0000313|EMBL:EDT70741.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_006_scaffold_192_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6751..7305)
DNA (555bp) protein (185aa)
Putative lipoprotein n=8 Tax=Clostridium perfringens RepID=H7CZW3_CLOPF
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EDT13674.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_006_scaffold_192_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7321..8112)
DNA (792bp) protein (264aa)
Metallo-beta-lactamase family protein n=5 Tax=Clostridium perfringens RepID=H7CZW4_CLOPF
metallo-beta-lactamase
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EIA15739.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_192_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8135..9388)
DNA (1254bp) protein (418aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 n=9 Tax=Clostridium perfringens RepID=MURA2_CLOPE
66_006_scaffold_192_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9728..10273
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPU3_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82313.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_192_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10467..10946
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZW7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15742.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_006_scaffold_192_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11002..11433
DNA (432bp) protein (144aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XH76_CLOPE
hypothetical protein; K09936 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82315.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_192_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11500..12696
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVU0_CLOPF
subtilase
Probable intracellular alkaline serine proteinase {ECO:0000313|EMBL:BAB82316.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_192_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12699..13751)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XH74_CLOPE
peptidase, M23/M37 family
Uncharacterized protein {ECO:0000313|EMBL:BAB82317.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_192_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13994..14983
DNA (990bp) protein (330aa)
DnaD and phage-associated domain-containing protein n=10 Tax=Clostridium perfringens RepID=H1CVU2_CLOPF
DNA replication protein DnaD
Putative DNA replication protein DnaD {ECO:0000313|EMBL:EDT25797.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_006_scaffold_192_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14980..15975
DNA (996bp) protein (332aa)
Putative DNA replication protein DnaC n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RR89_CLOPF
Putative DNA replication protein DnaC {ECO:0000313|EMBL:EDT13658.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
DNA replication protein DnaC; K02315 DNA replication protein DnaC
66_006_scaffold_192_trna_7
unknown

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comp(16070..16142)
DNA (73bp)
transferRNA Thr
66_006_scaffold_192_trna_6
unknown

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comp(16149..16222)
DNA (74bp)
transferRNA Asp
66_006_scaffold_192_trna_5
unknown

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comp(16240..16312)
DNA (73bp)
transferRNA Val
66_006_scaffold_192_trna_4
unknown

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comp(16322..16393)
DNA (72bp)
transferRNA Glu
66_006_scaffold_192_trna_3
unknown

Not on your lists

comp(16404..16477)
DNA (74bp)
transferRNA Asp
66_006_scaffold_192_trna_2
unknown

Not on your lists

comp(16494..16566)
DNA (73bp)
transferRNA Val
66_006_scaffold_192_trna_1
unknown

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comp(16574..16645)
DNA (72bp)
transferRNA Glu
66_006_scaffold_192_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16844..17413)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZX3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15748.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_006_scaffold_192_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17610..17915
DNA (306bp) protein (102aa)
HI0933 family flavoprotein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVU5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15749.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein; K07007
66_006_scaffold_192_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17975..18760
DNA (786bp) protein (262aa)
Pyridine nucleotide-disulphide oxidoreductase n=2 Tax=Clostridium perfringens RepID=Q0TM34_CLOP1
hypothetical protein; K07007
Uncharacterized protein {ECO:0000313|EMBL:EDS81703.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Displaying 29 items

View Taxonomy