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66_006_scaffold_201

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_201_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1311)
DNA (1311bp) protein (437aa)
Putative penicillin-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RE00_CLOPF
penicillin-binding protein 2; K05515 penicillin-binding protein 2
Probable penicillin-binding protein 2 {ECO:0000313|EMBL:BAB81846.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_201_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1320..1817)
DNA (498bp) protein (166aa)
Rod shape-determining protein MreD n=4 Tax=Clostridium perfringens RepID=B1BKF4_CLOPF
Rod shape-determining protein MreD {ECO:0000313|EMBL:EDT15578.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
mreD; rod shape-determining protein MreD; K03571 rod shape-determining protein MreD
66_006_scaffold_201_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1833..2684)
DNA (852bp) protein (284aa)
Cell shape-determining protein MreC n=8 Tax=Clostridium perfringens RepID=Q0TNH0_CLOP1
mreC; rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_006_scaffold_201_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2688..3716)
DNA (1029bp) protein (343aa)
Rod shape-determining protein MreB n=10 Tax=Clostridium perfringens RepID=H7CYG7_CLOPF
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins
Rod shape-determining protein MreB {ECO:0000313|EMBL:EIA16345.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_201_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3703..4419)
DNA (717bp) protein (239aa)
UPF0758 protein CPE2144 n=5 Tax=Clostridium perfringens RepID=Y2144_CLOPE
radC; DNA repair protein RadC; K03630 DNA repair protein RadC
UPF0758 protein CPE2144; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_201_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4466..5044)
DNA (579bp) protein (193aa)
Maf-like protein maf n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRY0_CLOPF
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
maf; Maf-like protein; K06287 septum formation protein
66_006_scaffold_201_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5270..6073)
DNA (804bp) protein (268aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XIH3_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81852.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_201_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6335..7153)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UYV7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT73252.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_006_scaffold_201_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7467..8918)
DNA (1452bp) protein (484aa)
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:EDT25305.1}; EC=3.4.13.- {ECO:0000313|EMBL:EDT25305.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
pepD; aminoacyl-histidine dipeptidase; K01270 dipeptidase D [EC:3.4.13.-]
Aminoacyl-histidine dipeptidase n=2 Tax=Clostridium perfringens RepID=B1BRX7_CLOPF
66_006_scaffold_201_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9051..10475
DNA (1425bp) protein (475aa)
pyk; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Pyruvate kinase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTD0_CLOPF
66_006_scaffold_201_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10879..12015)
DNA (1137bp) protein (379aa)
Ribosomal protein S1 family n=3 Tax=Clostridium perfringens RepID=Q0TNG2_CLOP1
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
Ribosomal protein S1 family {ECO:0000313|EMBL:EDT25274.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_006_scaffold_201_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12161..12364)
DNA (204bp) protein (68aa)
Heavy metal binding protein n=9 Tax=Clostridium perfringens RepID=Q0TNG1_CLOP1
heavy metal binding protein
Heavy metal binding protein {ECO:0000313|EMBL:EDT15561.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_006_scaffold_201_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12469..13233)
DNA (765bp) protein (255aa)
UPF0246 protein CPE2152 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Y2152_CLOPE
hypothetical protein; K09861 hypothetical protein
UPF0246 protein CPE2152 {ECO:0000255|HAMAP-Rule:MF_00652}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_201_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13399..13809)
DNA (411bp) protein (137aa)
CBS domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CYH7_CLOPF
CBS domain-containing protein
CBS domain-containing protein {ECO:0000313|EMBL:EIA16355.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_201_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13889..14797)
DNA (909bp) protein (303aa)
Exonuclease family protein n=10 Tax=Clostridium perfringens RepID=H7CYH8_CLOPF
exonuclease
Exonuclease family protein {ECO:0000313|EMBL:EDT15540.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_006_scaffold_201_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15052..16863)
DNA (1812bp) protein (604aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNF7_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81861.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_201_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16979..17446)
DNA (468bp) protein (156aa)
MutS domain protein n=3 Tax=Clostridium perfringens RepID=Q0SR25_CLOPS
MutS domain-containing protein
MutS domain protein {ECO:0000313|EMBL:ABG85466.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Displaying 17 items

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