ggKbase home page

66_006_scaffold_235

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_235_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(68..955)
DNA (888bp) protein (296aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUZ3_CLOPF
Putative lipoprotein {ECO:0000313|EMBL:EDT14464.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
lipoprotein
66_006_scaffold_235_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1064..1333)
DNA (270bp) protein (90aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CWT5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16836.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_006_scaffold_235_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1528..3543)
DNA (2016bp) protein (672aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CWT6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16837.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_006_scaffold_235_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3847..4797)
DNA (951bp) protein (317aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XK46_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24700.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_006_scaffold_235_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4894..5586
DNA (693bp) protein (231aa)
undecaprenyl diphosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
Putative undecaprenyl diphosphate synthase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RS42_CLOPF
Putative undecaprenyl diphosphate synthase {ECO:0000313|EMBL:EDT24656.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_006_scaffold_235_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5591..7090
DNA (1500bp) protein (500aa)
Phytoene dehydrogenase family protein n=2 Tax=Clostridium perfringens RepID=Q0TQ46_CLOP1
phytoene dehydrogenase
Phytoene dehydrogenase family protein {ECO:0000313|EMBL:EDT27088.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_006_scaffold_235_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7122..8813)
DNA (1692bp) protein (564aa)
GGDEF/HD domain protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V7N7_CLOPF
GGDEF/HD domain protein {ECO:0000313|EMBL:EDT70171.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
diguanylate cyclase
66_006_scaffold_235_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8873..9007)
DNA (135bp) protein (45aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CWU1_CLOPF
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EIA16842.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_235_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9028..9672)
DNA (645bp) protein (215aa)
Putative AgrB-like protein {ECO:0000256|HAMAP-Rule:MF_00784}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00784};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative AgrB-like protein 2 n=10 Tax=Clostridium perfringens RepID=AGRB2_CLOPE
accessory gene regulator protein B; K07813 accessory gene regulator B
66_006_scaffold_235_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9674..10213)
DNA (540bp) protein (180aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CWU3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16844.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_235_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10152..10718)
DNA (567bp) protein (189aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CWU4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81269.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_235_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10872..11375)
DNA (504bp) protein (168aa)
Membrane protein, DedA family n=3 Tax=Clostridium perfringens RepID=B1BV04_CLOPF
Membrane protein {ECO:0000313|EMBL:AER57910.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
hypothetical protein
66_006_scaffold_235_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11693..12688)
DNA (996bp) protein (332aa)
Calcium/proton exchanger n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V7P2_CLOPF
Calcium/proton exchanger {ECO:0000313|EMBL:EDT70176.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein; K07301 inner membrane protein
66_006_scaffold_235_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12818..13897)
DNA (1080bp) protein (360aa)
dinB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV {ECO:0000255|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000255|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000255|HAMAP-Rule:MF_01113};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
DNA polymerase IV n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CRG1_CLOPF
66_006_scaffold_235_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14039..14671)
DNA (633bp) protein (211aa)
ppiB; peptidyl-prolyl cis-trans isomerase, cyclophilin-type; K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BV07_CLOPF
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type {ECO:0000313|EMBL:EDT14467.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_006_scaffold_235_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14849..15253)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RFY3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27141.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_006_scaffold_235_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15370..15702)
DNA (333bp) protein (111aa)
HAD hydrolase, IIB family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TQ35_CLOP1
HAD family hydrolase; K07024
HAD hydrolase, IIB family {ECO:0000313|EMBL:EDT27068.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Displaying 17 items

View Taxonomy