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66_006_scaffold_238

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_006_scaffold_238_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..192)
DNA (192bp) protein (64aa)
add; adenosine deaminase (EC:3.5.4.4); K01488 adenosine deaminase [EC:3.5.4.4]
Adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00540, ECO:0000256|SAAS:SAAS00001830}; EC=3.5.4.4 {ECO:0000256|HAMAP-Rule:MF_00540, ECO:0000256|SAAS:SAAS00001830};; Adenosine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_00540}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Adenosine deaminase n=2 Tax=Clostridium perfringens RepID=B1BSB9_CLOPF
66_006_scaffold_238_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(550..2700)
DNA (2151bp) protein (717aa)
nrdD; anaerobic ribonucleoside triphosphate reductase (EC:1.17.4.2); K00527 ribonucleoside-triphosphate reductase [EC:1.17.4.2]
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EDT15369.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EDT15369.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Clostridium perfringens RepID=B1BHT3_CLOPF
66_006_scaffold_238_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2960..4027
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XHH6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80684.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_006_scaffold_238_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4287..5132
DNA (846bp) protein (282aa)
DegV domain-containing protein CPE2509 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Y2509_CLOPE
degV family protein
DegV domain-containing protein CPE2509; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_238_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5135..5575
DNA (441bp) protein (147aa)
PadR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CZL5_CLOPF
PadR family transcriptional regulator
PadR family transcriptional regulator {ECO:0000313|EMBL:EIA15815.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_238_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5627..5815)
DNA (189bp) protein (63aa)
Putative ferredoxin n=5 Tax=Clostridium perfringens RepID=B1BSC4_CLOPF
Putative ferredoxin {ECO:0000313|EMBL:EDT15377.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ferredoxin; K05337 ferredoxin
66_006_scaffold_238_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5962..6816)
DNA (855bp) protein (285aa)
Protein mrp homolog n=10 Tax=Clostridium perfringens RepID=MRP_CLOPE
ATPase
Mrp/NBP35 ATP-binding family protein {ECO:0000313|EMBL:EDT15379.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_006_scaffold_238_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6837..7676)
DNA (840bp) protein (280aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XHH2_CLOPE
lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:BAB82219.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_006_scaffold_238_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7666..8436)
DNA (771bp) protein (257aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
Prolipoprotein diacylglyceryl transferase 2 {ECO:0000255|HAMAP-Rule:MF_01147}; EC=2.4.99.- {ECO:0000255|HAMAP-Rule:MF_01147};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Prolipoprotein diacylglyceryl transferase 2 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=LGT2_CLOPE
66_006_scaffold_238_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8539..9129)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMD8_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86907.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_006_scaffold_238_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9260..10870)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHG9_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:BAB82222.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
hypothetical protein
66_006_scaffold_238_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10970..11827)
DNA (858bp) protein (286aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
Ribosomal RNA small subunit methyltransferase A n=8 Tax=Clostridium perfringens RepID=RSMA_CLOP1
66_006_scaffold_238_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11839..12387)
DNA (549bp) protein (183aa)
primase-like protein; K05985 ribonuclease M5 [EC:3.1.26.8]
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Ribonuclease M5 n=3 Tax=Clostridium perfringens RepID=Q8XHG7_CLOPE
66_006_scaffold_238_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12528..13550)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XHG6_CLOPE
hypothetical protein
3D/G5 domain protein {ECO:0000313|EMBL:EDT27175.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_006_scaffold_238_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13794..14564)
DNA (771bp) protein (257aa)
hydrolase, TatD family; K03424 TatD DNase family protein [EC:3.1.21.-]
Hydrolase, TatD family protein n=7 Tax=Clostridium perfringens RepID=H7CZM5_CLOPF
Hydrolase, TatD family protein {ECO:0000313|EMBL:EIA15825.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_006_scaffold_238_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14583..15605)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFP4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27172.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
Displaying 16 items

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