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66_008_scaffold_19

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Displaying items 1-30 of 138 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_19_1
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45..878)
DNA (834bp) protein (278aa)
Extracellular solute-binding protein family 3 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SVT5_CLOC7
family 3 extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ADL53146.1}; Flags: Precursor;; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
66_008_scaffold_19_2
Haemophilus pittmaniae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(894..1631)
DNA (738bp) protein (246aa)
glutamate and aspartate transporter subunit; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
ABC transporter, ATP-binding protein n=1 Tax=Haemophilus pittmaniae HK 85 RepID=F9Q8Z0_9PAST
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EGV06114.1}; TaxID=1035188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus pittmaniae HK 85.;"
66_008_scaffold_19_3
Aggregatibacter segnis, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1645..2313)
DNA (669bp) protein (223aa)
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Aggregatibacter segnis ATCC 33393 RepID=E6KZ70_9PAST
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:EFU67249.1}; TaxID=888057 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Aggregatibacter segnis ATCC 33393.;"
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein
66_008_scaffold_19_4
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2303..2962)
DNA (660bp) protein (220aa)
Arginine ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9H1I5_HAEHA
Arginine ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:EGT78891.1}; TaxID=1028805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M21621.;"
artM; ArtM protein; K02029 polar amino acid transport system permease protein
66_008_scaffold_19_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3390..4037)
DNA (648bp) protein (216aa)
Putative Formiminotransferase-cyclodeaminase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ERT8_9CLOT
Formiminotransferase-cyclodeaminase family protein {ECO:0000313|EMBL:AIY84433.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
formiminotransferase-cyclodeaminase
66_008_scaffold_19_6
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4110..4646)
DNA (537bp) protein (179aa)
Nitroreductase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PW88_9CLOT
Nitroreductase {ECO:0000313|EMBL:EET86502.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
Nitroreductase family protein
66_008_scaffold_19_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4703..5611)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8G0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98975.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
permease; K07088
66_008_scaffold_19_8
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5637..6764)
DNA (1128bp) protein (376aa)
Glycosyltransferase n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VTH0_CLOBO
Glycosyl transferase {ECO:0000313|EMBL:KEI12859.1}; TaxID=1443122 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi B str. NCTC 9691.;"
glycosyltransferase
66_008_scaffold_19_9
Clostridium sp. K25, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6770..8176)
DNA (1407bp) protein (469aa)
Membrane protein involved in the export of O-antigen and teichoic acid, RfbX family n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VTH1_CLOBO
Teichoic acid transporter {ECO:0000313|EMBL:KEI06980.1}; TaxID=1443109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. K25.;"
polysaccharide biosynthesis protein
66_008_scaffold_19_10
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8239..9456)
DNA (1218bp) protein (406aa)
O-antigen polymerase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SMZ4_CLOC7
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ADL51860.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
66_008_scaffold_19_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9479..10186)
DNA (708bp) protein (236aa)
putative N-acetylmannosaminyltransferase; K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187]
UDP-N-acetyl-D-mannosaminuronic acid transferase n=1 Tax=Clostridium botulinum RepID=UPI0002EDBBFF
UDP-N-acetyl-D-mannosaminuronic acid transferase {ECO:0000313|EMBL:KEI02193.1}; TaxID=1443117 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum D str. 16868.;"
66_008_scaffold_19_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10198..11352)
DNA (1155bp) protein (385aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNY2_CLOSA
tetratricopeptide TPR_2 repeat protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:AGX42233.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
66_008_scaffold_19_13
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11378..13096)
DNA (1719bp) protein (573aa)
pgcA; phosphoglucomutase PgcA (EC:5.4.2.2)
Phosphoglucomutase/phosphomannomutase alpha/beta/subunit n=1 Tax=Clostridium sp. CAG:221 RepID=R6FWA9_9CLOT
Phosphoglucomutase/phosphomannomutase alpha/beta/subunit {ECO:0000313|EMBL:CDB16380.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
66_008_scaffold_19_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13224..13811)
DNA (588bp) protein (196aa)
50S ribosomal protein L25 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FA59_9CLOT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
rplY2; 50S ribosomal protein L25
66_008_scaffold_19_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14021..15502
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2K9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97626.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Orn/Lys/Arg decarboxylase major region
66_008_scaffold_19_16
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15514..16998)
DNA (1485bp) protein (495aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6L129_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDB75866.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
66_008_scaffold_19_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17020..17466)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRC4_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42226.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
66_008_scaffold_19_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17591..18541)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFQ7_9CLOT
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:AIY85129.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
PfkB family kinase
66_008_scaffold_19_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18639..20996)
DNA (2358bp) protein (786aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
MutS2 protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H769_9CLOT
mutS1; MutS2 protein MutS
66_008_scaffold_19_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21000..23345)
DNA (2346bp) protein (782aa)
peptidase, U32 family; K08303 putative protease [EC:3.4.-.-]
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3E8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97620.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
66_008_scaffold_19_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23485..24708)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RB45_CLOPF
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein; K09888 cell division protein ZapA
66_008_scaffold_19_22

Not on your lists

24964..26157
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036E0352
Uncharacterized protein {ECO:0000313|EMBL:ETJ17258.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
CapA domain-containing protein
66_008_scaffold_19_23
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26289..28664)
DNA (2376bp) protein (792aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
pheT; phenylalanine--tRNA ligase beta subunit PheT (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q7S1_9CLOT
66_008_scaffold_19_24
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(28679..29698)
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
pheS; phenylalanine--tRNA ligase alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q8Q3_9CLOT
66_008_scaffold_19_25
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30037..30828)
DNA (792bp) protein (264aa)
ysgA; tRNA/rRNA methyltransferase YsgA (EC:2.1.1.-)
Putative tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F056_9CLOT
Putative tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:CDG01951.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
66_008_scaffold_19_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30843..31511)
DNA (669bp) protein (223aa)
Putative Potassium uptake protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EL59_9CLOT
TrkA-N domain protein {ECO:0000313|EMBL:AIY84251.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
potassium uptake protein; K03499 trk system potassium uptake protein TrkA
66_008_scaffold_19_27
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31523..32878)
DNA (1356bp) protein (452aa)
Putative Potassium uptake protein, TrkH family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FA72_9CLOT
Potassium uptake, TrkH family protein {ECO:0000313|EMBL:AIY84170.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
TrkH family potassium uptake protein; K03498 trk system potassium uptake protein TrkH
66_008_scaffold_19_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(33099..33458)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=10 Tax=Clostridium perfringens RepID=RL20_CLOP1
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_008_scaffold_19_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(33483..33680)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4C6_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
66_008_scaffold_19_30
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33702..34328)
DNA (627bp) protein (209aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0Z2_9CLOT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
infC; translation initiation factor IF-3
Displaying items 1-30 of 138 in total

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