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66_008_scaffold_27

Search features with annotation key words

Displaying items 1-30 of 132 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_27_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(340..1545)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5U7A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ66996.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
peptidase S8 and S53 subtilisin kexin sedolisin
66_008_scaffold_27_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1676..3850)
DNA (2175bp) protein (725aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
DNA topoisomerase III; K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase n=2 Tax=Clostridium butyricum DKU-01 RepID=M8J9Z2_CLOBU
66_008_scaffold_27_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4035..5558)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3P9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97885.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
66_008_scaffold_27_4
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5738..5929)
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Clostridium botulinum RepID=B2TMM5_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:KGN03124.1}; TaxID=1444290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4570.;"
hypothetical protein
66_008_scaffold_27_5
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5942..6586)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NKI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29638.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
prophage LambdaCh01, restriction endonuclease
66_008_scaffold_27_6
Listeriaceae bacterium FSL A5-0209, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6741..8489
DNA (1749bp) protein (583aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Listeria monocytogenes SLCC2540 RepID=J7PLC9_LISMN
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGL39100.1}; TaxID=1497679 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae.;" source="Listeriaceae bacterium FSL A5-0209.;"
ABC transporter ATP-binding protein/permease
66_008_scaffold_27_7
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8495..10243
DNA (1749bp) protein (583aa)
Multidrug resistance ABC transporter n=1 Tax=Clostridium tetani 12124569 RepID=U6EW88_CLOTA
Multidrug resistance ABC transporter {ECO:0000313|EMBL:CDI48485.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
multidrug resistance ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
66_008_scaffold_27_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10283..11692)
DNA (1410bp) protein (470aa)
Uncharacterized protein {ECO:0000313|EMBL:AIY83015.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
66_008_scaffold_27_9
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11788..13713)
DNA (1926bp) protein (642aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Clostridium beijerinckii RepID=UPI0003169F4A
ABC transporter related {ECO:0000313|EMBL:AJG99418.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup
66_008_scaffold_27_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13821..14561)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TBK2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57278.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
66_008_scaffold_27_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14618..15037)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum B str. Eklund 17B(NRP) RepID=U4PC62_CLOBO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY79764.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
66_008_scaffold_27_12
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15131..16552
DNA (1422bp) protein (474aa)
stage V sporulation protein AF n=1 Tax=Clostridium sp. JC122 RepID=UPI000287BE5A
Stage V sporulation protein AF {ECO:0000313|EMBL:CDM68747.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
spoVAF; stage V sporulation protein AF; K06408 stage V sporulation protein AF
66_008_scaffold_27_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16910..17665)
DNA (756bp) protein (252aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IY22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41596.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
66_008_scaffold_27_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17964..19331)
DNA (1368bp) protein (456aa)
UPF0210 protein CCH01_014880 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FNG0_9CLOT
UPF0210 protein CCH01_014880 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein UPF0210
66_008_scaffold_27_15
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19347..19616)
DNA (270bp) protein (90aa)
UPF0237 protein CCH01_014890 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ESK4_9CLOT
UPF0237 protein CCH01_014890 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
ACT domain-containing protein; K07166 ACT domain-containing protein
66_008_scaffold_27_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19635..20615)
DNA (981bp) protein (327aa)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:AIY78713.1}; EC=1.4.1.16 {ECO:0000313|EMBL:AIY78713.1};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
diaminopimelate dehydrogenase (EC:1.4.1.16); K03340 diaminopimelate dehydrogenase [EC:1.4.1.16]
cytochrome C2 n=1 Tax=Clostridium botulinum RepID=UPI00036C5152
66_008_scaffold_27_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20777..21721)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q7S5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY24024.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
66_008_scaffold_27_18
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21766..22434)
DNA (669bp) protein (223aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
3-methyladenine DNA glycosylase (EC:3.2.2.21); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21]
3-methyladenine DNA glycosylase n=1 Tax=Clostridium tetani 12124569 RepID=U6EUJ3_CLOTA
66_008_scaffold_27_19
unknown

Not on your lists

comp(22514..22648)
DNA (135bp) protein (45aa)

This feature has no annotations

66_008_scaffold_27_20
unknown

Not on your lists

comp(22745..23062)
DNA (318bp) protein (106aa)

This feature has no annotations

66_008_scaffold_27_21
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23200..23652
DNA (453bp) protein (151aa)
acetyltransferase; K00676 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
Acetyltransferase family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CVC1_CLOSO
Acetyltransferase {ECO:0000313|EMBL:CEP44584.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
66_008_scaffold_27_22
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23711..24175)
DNA (465bp) protein (155aa)
Putative regulatory protein n=1 Tax=Fusobacterium sp. CAG:439 RepID=R7J8E2_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:KEZ88477.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
66_008_scaffold_27_23
unknown

Not on your lists

comp(24372..24518)
DNA (147bp) protein (49aa)

This feature has no annotations

66_008_scaffold_27_24
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24538..26856)
DNA (2319bp) protein (773aa)
gshAB; glutathione biosynthesis bifunctional protein GshAB (EC:6.3.2.2 6.3.2.3)
Glutathione biosynthesis bifunctional protein GshAB n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TUQ7_9CLOT
Glutathione biosynthesis bifunctional protein GshAB {ECO:0000256|HAMAP-Rule:MF_00782}; Gamma-GCS-GS {ECO:0000256|HAMAP-Rule:MF_00782}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
66_008_scaffold_27_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26849..28168)
DNA (1320bp) protein (440aa)
Mate efflux family protein n=2 Tax=Clostridium botulinum B RepID=B2TNJ4_CLOBB
mate efflux family protein
Mate efflux family protein {ECO:0000313|EMBL:ACD23595.1}; Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps {ECO:0000313|EMBL:CDH91515.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
66_008_scaffold_27_26
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28181..28456)
DNA (276bp) protein (92aa)
ArsR family transcriptional regulator n=1 Tax=Clostridium tetani 12124569 RepID=U6EZ65_CLOTA
ArsR family transcriptional regulator {ECO:0000313|EMBL:CDI50038.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
66_008_scaffold_27_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28668..30386)
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A249B
Uncharacterized protein {ECO:0000313|EMBL:EEH98736.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
myosin-cross-reactive antigen; K10254 myosin-crossreactive antigen
66_008_scaffold_27_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30509..30826
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI000309C487
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD21861.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
66_008_scaffold_27_29
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30876..31436)
DNA (561bp) protein (187aa)
p-loop ATPase n=1 Tax=Clostridium sp. CAG:221 RepID=R6G2H8_9CLOT
p-loop ATPase {ECO:0000313|EMBL:CDB15536.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
66_008_scaffold_27_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31618..31797
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2B9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96614.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
Displaying items 1-30 of 132 in total

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