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66_008_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 92 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_29_1
unknown

Not on your lists

comp(198..377)
DNA (180bp) protein (60aa)

This feature has no annotations

66_008_scaffold_29_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1023..1823)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJJ6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32292.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
MerR family transcriptional regulator
66_008_scaffold_29_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1931..3658
DNA (1728bp) protein (576aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J4W8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93307.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC transport system ATP-binding and permease protein; K06147 ATP-binding cassette, subfamily B, bacterial
66_008_scaffold_29_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3663..5498
DNA (1836bp) protein (612aa)
UPI0003D5B655 related cluster n=1 Tax=unknown RepID=UPI0003D5B655
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:ETI87705.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ABC transport system ATP-binding and permease protein; K06147 ATP-binding cassette, subfamily B, bacterial
66_008_scaffold_29_5
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5725..6711
DNA (987bp) protein (329aa)
Choloylglycine hydrolase {ECO:0000313|EMBL:CDM68924.1}; EC=3.5.1.24 {ECO:0000313|EMBL:CDM68924.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
choloylglycine hydrolase (EC:3.5.1.24); K01442 choloylglycine hydrolase [EC:3.5.1.24]
Choloylglycine hydrolase (Conjugated bile acidhydrolase) (Cbah) (Bile salt hydrolase) n=1 Tax=Clostridium sp. CAG:265 RepID=R6KMG9_9CLOT
66_008_scaffold_29_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6831..7559
DNA (729bp) protein (243aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N000_CLOSA
transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:AGX45097.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
66_008_scaffold_29_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7747..9168
DNA (1422bp) protein (474aa)
Glycosidases (EC:2.4.1.7)
Glycosidases {ECO:0000313|EMBL:CBL13462.1}; EC=2.4.1.7 {ECO:0000313|EMBL:CBL13462.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Glycosidases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1H2_9FIRM
66_008_scaffold_29_8
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9186..10490
DNA (1305bp) protein (435aa)
PTS system, lactose/cellobiose family IIC subunit n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M2G1_CLOB8
PTS system lactose/cellobiose family transporter subunit IIC; K02761 PTS system, cellobiose-specific IIC component
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
66_008_scaffold_29_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10502..11914
DNA (1413bp) protein (471aa)
glycoside hydrolase family protein; K01188 beta-glucosidase [EC:3.2.1.21]
6-phospho-beta-glucosidase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAH0_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJU71588.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
66_008_scaffold_29_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12030..12986
DNA (957bp) protein (319aa)
fructokinase; K00847 fructokinase [EC:2.7.1.4]
Fructokinase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UZN3_CLOBO
Ribokinase-like domain-containing protein {ECO:0000313|EMBL:AJH01951.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
66_008_scaffold_29_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13069..13599
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JE14_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32682.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
66_008_scaffold_29_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13641..14330)
DNA (690bp) protein (230aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UQK0_CLOBO
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KIL08909.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
CRP
66_008_scaffold_29_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14435..15619
DNA (1185bp) protein (395aa)
Probable transporter n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V146_CLOBA
transporter
MFS transporter {ECO:0000313|EMBL:KIL08910.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
66_008_scaffold_29_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15740..16465
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY29275.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
66_008_scaffold_29_15
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16547..17260
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1R2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ85840.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
66_008_scaffold_29_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17295..18035)
DNA (741bp) protein (247aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS70_CLOSA
iII2; exonuclease RNase T and DNA polymerase III
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:AGX42486.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
66_008_scaffold_29_17
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18164..18844
DNA (681bp) protein (227aa)
Predicted membrane protein hemolysin III homolog n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LZU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDM70034.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Predicted membrane protein, hemolysin III homolog
66_008_scaffold_29_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18948..20435
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HF83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97117.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
arylsulfotransferase
66_008_scaffold_29_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20448..21368
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HCX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97118.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NlpA lipoprotein
66_008_scaffold_29_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21368..22087
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2W7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97119.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
66_008_scaffold_29_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22074..22820
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H213_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97120.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein
66_008_scaffold_29_22
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22913..23818
DNA (906bp) protein (302aa)
Regulatory protein DeoR n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DN89_HALPG
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:AIY84551.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
regulatory protein DeoR
66_008_scaffold_29_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23891..24502
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T9E0_METSL
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:AIY83592.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
hypothetical protein
66_008_scaffold_29_24
unknown

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comp(24972..25169)
DNA (198bp) protein (66aa)

This feature has no annotations

66_008_scaffold_29_25
unknown

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25728..26336
DNA (609bp) protein (203aa)

This feature has no annotations

66_008_scaffold_29_26
unknown

Not on your lists

comp(26393..26653)
DNA (261bp) protein (87aa)

This feature has no annotations

66_008_scaffold_29_27
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26774..27379
DNA (606bp) protein (202aa)
Uncharacterized protein n=11 Tax=Bacillus cereus group RepID=M4LJG4_BACTK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERH96588.1}; TaxID=1324966 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis T01-328.;"
66_008_scaffold_29_28
unknown

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comp(27442..27675)
DNA (234bp) protein (78aa)

This feature has no annotations

66_008_scaffold_29_29
unknown

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comp(27832..28566)
DNA (735bp) protein (245aa)

This feature has no annotations

66_008_scaffold_29_30
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28677..28955
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0003026708
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR35527.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
Displaying items 1-30 of 92 in total

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