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66_008_scaffold_98

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Displaying items 1-30 of 53 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_98_trna_1
unknown

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150..221
DNA (72bp)
transferRNA Asn
66_008_scaffold_98_1
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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483..1175
DNA (693bp) protein (231aa)
Two-component system response regulator n=1 Tax=Clostridium colicanis 209318 RepID=N9WDZ7_9CLOT
Two-component system response regulator {ECO:0000313|EMBL:ENZ01065.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
alkaline phosphatase synthesis transcriptional regulatory proteinphoP
66_008_scaffold_98_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1179..2591
DNA (1413bp) protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
Alkaline phosphatase synthesis sensor protein PhoR n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZE7_CLOBA
alkaline phosphatase synthesis sensor protein PhoR
66_008_scaffold_98_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2575..4065
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8T3_9CLOT
Putative lipoprotein {ECO:0000313|EMBL:AIY83843.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
putative lipoprotein
66_008_scaffold_98_4
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4076..5458
DNA (1383bp) protein (461aa)
Modulator of DNA gyrase family protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VBJ2_CLOBI
Modulator of DNA gyrase family protein {ECO:0000313|EMBL:EQK38057.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
tldD; regulatory protease; K03568 TldD protein
66_008_scaffold_98_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5468..6811
DNA (1344bp) protein (448aa)
Modulator of DNA gyrase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DAE2_CLODI
Modulator of DNA gyrase family protein {ECO:0000313|EMBL:EQF23411.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
regulatory protease; K03592 PmbA protein
66_008_scaffold_98_6
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6853..8718)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WDZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ01060.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
sulfatase
66_008_scaffold_98_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8878..9450
DNA (573bp) protein (191aa)
Selenium metabolism protein YedF n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVG0_9CLOT
Selenium metabolism protein YedF {ECO:0000313|EMBL:EKQ50877.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
66_008_scaffold_98_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9463..10263)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2B1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55595.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
66_008_scaffold_98_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10376..11335
DNA (960bp) protein (320aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZF3_CLOBA
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KJU73092.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
66_008_scaffold_98_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11316..11894)
DNA (579bp) protein (193aa)
Putative Lysophospholipase L1-like esterase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6END9_9CLOT
Putative Lysophospholipase L1-like esterase {ECO:0000313|EMBL:CDG02697.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
lipolytic protein, G-D-S-L family
66_008_scaffold_98_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11911..12531)
DNA (621bp) protein (207aa)
Holliday junction resolvase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6U6_9CLOT
Endodeoxyribonuclease RusA family {ECO:0000313|EMBL:EES48204.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
endodeoxyribonuclease RusA family
66_008_scaffold_98_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12751..13770
DNA (1020bp) protein (340aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia;
putative DNA-binding/iron metalloprotein/AP endonuclease; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Clostridium colicanis 209318 RepID=N9WDY5_9CLOT
66_008_scaffold_98_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13771..14799
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZF7_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08719.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
66_008_scaffold_98_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15109..16308
DNA (1200bp) protein (400aa)
Trypsin domain protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZF8_CLOBA
trypsin domain-containing protein
Serine protease {ECO:0000313|EMBL:KIL08720.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
66_008_scaffold_98_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16375..19104
DNA (2730bp) protein (910aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H7S9_9CLOT
ATPase AAA {ECO:0000313|EMBL:KJU73098.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
sigma-54 dependent transcriptional regulator
66_008_scaffold_98_16
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19339..19647
DNA (309bp) protein (103aa)
PTS system, lactose/cellobiose-specific family, IIB component; K02760 PTS system, cellobiose-specific IIB component [EC:2.7.1.69]
PTS system, lactose/cellobiose family IIB component n=1 Tax=Clostridium colicanis 209318 RepID=N9XZN0_9CLOT
PTS system, lactose/cellobiose family IIB component {ECO:0000313|EMBL:ENZ01052.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
66_008_scaffold_98_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19730..20026
DNA (297bp) protein (99aa)
PTS system lactose/cellobiose-specific transporter subunit IIA; K02759 PTS system, cellobiose-specific IIA component [EC:2.7.1.69]
Lichenan-specific phosphotransferase enzyme iia component n=3 Tax=Clostridium butyricum RepID=B1R069_CLOBU
PTS system, Lactose/Cellobiose specific IIA subunit {ECO:0000313|EMBL:AIY82892.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
66_008_scaffold_98_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20157..21050
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WDY0_9CLOT
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:AIY84058.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
BadF/BadG/BcrA/BcrD type ATPase
66_008_scaffold_98_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20998..22158
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XYQ8_9CLOT
Outer surface protein {ECO:0000313|EMBL:KJU73102.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
outer surface protein; K09963 hypothetical protein
66_008_scaffold_98_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22420..23778
DNA (1359bp) protein (453aa)
MATE efflux family protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XZM4_9CLOT
Multidrug transporter MatE {ECO:0000313|EMBL:KJU73107.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Na+ driven multidrug efflux pump
66_008_scaffold_98_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23864..24265
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2UZF9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08721.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
66_008_scaffold_98_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24379..25485
DNA (1107bp) protein (369aa)
Ethanolamine transporter n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZG0_CLOBA
Ethanolamine utilization protein EutH {ECO:0000313|EMBL:KIL08722.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
ethanolamine transporter; K04023 ethanolamine transporter
66_008_scaffold_98_23
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25482..26849
DNA (1368bp) protein (456aa)
Putative MATE efflux family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EIY4_9CLOT
Putative MATE efflux family protein {ECO:0000313|EMBL:CDG01197.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
66_008_scaffold_98_24
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26896..27369)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002EACDF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD69979.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
66_008_scaffold_98_25
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27500..28363)
DNA (864bp) protein (288aa)
fba1; fructose-bisphosphate aldolase Fba (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EBM0_9FIRM
Fructose-1,6-bisphosphate aldolase, class II {ECO:0000313|EMBL:ERI90081.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
66_008_scaffold_98_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28525..29448)
DNA (924bp) protein (308aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
argF; ornithine carbamoyltransferase; K00611 ornithine carbamoyltransferase [EC:2.1.3.3]
ornithine carbamoyltransferase n=1 Tax=Clostridium botulinum RepID=UPI0003796016
66_008_scaffold_98_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29501..30649)
DNA (1149bp) protein (383aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
acetylornithine aminotransferase; K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
Acetylornithine aminotransferase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKV4_9CLOT
66_008_scaffold_98_28
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30661..31515)
DNA (855bp) protein (285aa)
argB; acetylglutamate kinase ArgB (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Acetylglutamate kinase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLP5_CLOSA
66_008_scaffold_98_29
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31535..32758)
DNA (1224bp) protein (408aa)
argJ; arginine biosynthesis bifunctional protein ArgJ; K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
ornithine acetyltransferase n=1 Tax=Clostridium botulinum RepID=UPI00037478E9
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
Displaying items 1-30 of 53 in total

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