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66_008_scaffold_119

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_119_trna_7
unknown

Not on your lists

comp(27..97)
DNA (71bp)
transferRNA Gly
66_008_scaffold_119_trna_6
unknown

Not on your lists

comp(107..178)
DNA (72bp)
transferRNA Gly
66_008_scaffold_119_trna_5
unknown

Not on your lists

comp(185..265)
DNA (81bp)
transferRNA Leu
66_008_scaffold_119_trna_4
unknown

Not on your lists

comp(274..346)
DNA (73bp)
transferRNA Lys
66_008_scaffold_119_trna_3
unknown

Not on your lists

comp(405..477)
DNA (73bp)
transferRNA His
66_008_scaffold_119_trna_2
unknown

Not on your lists

comp(485..558)
DNA (74bp)
transferRNA Arg
66_008_scaffold_119_trna_1
unknown

Not on your lists

comp(644..716)
DNA (73bp)
transferRNA Pro
66_008_scaffold_119_1
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(894..1376)
DNA (483bp) protein (161aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
Phosphoesterase, MJ0936 family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TWC6_9CLOT
phosphodiesterase; K07095
66_008_scaffold_119_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1390..2001)
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Non-canonical purine NTP pyrophosphatase (EC:3.6.1.19)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1Q2_CLOBU
66_008_scaffold_119_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2003..2752)
DNA (750bp) protein (250aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56]
Ribonuclease PH n=2 Tax=Clostridium botulinum B RepID=RNPH_CLOBB
66_008_scaffold_119_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2770..3747)
DNA (978bp) protein (326aa)
Hydrogenase maturation factor n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8B9_9CLOT
Hydrogenase maturation factor {ECO:0000313|EMBL:EKQ51834.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
AIR synthase-like protein
66_008_scaffold_119_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3839..5359
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YS37_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55574.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
66_008_scaffold_119_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5369..6865)
DNA (1497bp) protein (499aa)
Putative extracellular solute-binding protein n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TJ02_CLOBB
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Putative extracellular solute-binding protein {ECO:0000313|EMBL:ACD21762.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
66_008_scaffold_119_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7008..7319
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R0A5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:AIY84103.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
hypothetical protein
66_008_scaffold_119_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7464..7733)
DNA (270bp) protein (90aa)
Membrane protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FSL1_CLOPA
Membrane protein {ECO:0000313|EMBL:ETD67289.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
66_008_scaffold_119_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7735..9726)
DNA (1992bp) protein (664aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ligA; DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HC55_9CLOT
66_008_scaffold_119_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9747..11996)
DNA (2250bp) protein (750aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
ATP-dependent DNA helicase PcrA n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U8B7_9CLOT
66_008_scaffold_119_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12072..12749)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY27550.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
66_008_scaffold_119_12
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12890..13333
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D5F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI91553.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
66_008_scaffold_119_13
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13402..14076
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EJL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGK83838.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
66_008_scaffold_119_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14143..15804
DNA (1662bp) protein (554aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18]
Glutamine--tRNA ligase n=4 Tax=Clostridium perfringens RepID=SYQ_CLOP1
66_008_scaffold_119_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15812..16204
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8U0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99325.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
66_008_scaffold_119_16
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16247..17902)
DNA (1656bp) protein (552aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17]
Glutamate--tRNA ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FB28_9CLOT
66_008_scaffold_119_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18590..19306)
DNA (717bp) protein (239aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
rluB1; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.19)
Pseudouridine synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGR2_CLOBU
66_008_scaffold_119_18
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19497..20186)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XYF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00622.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
lytic murein transglycosylase
66_008_scaffold_119_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20197..22200)
DNA (2004bp) protein (668aa)
Putative Two component regulator three Y motif protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EWG3_9CLOT
Putative Two component regulator three Y motif protein {ECO:0000313|EMBL:CDG00551.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
triple tyrosine motif-containing protein
66_008_scaffold_119_20
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22339..22824)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FT16_CLOPA
UPF0178 protein X276_20440 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein; K09768 hypothetical protein
66_008_scaffold_119_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22787..24136)
DNA (1350bp) protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pgi; glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=5 Tax=Clostridium butyricum RepID=B1R095_CLOBU
66_008_scaffold_119_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24429..25715)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEH8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96581.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
lipid A core-O-antigen ligase-like enyme
66_008_scaffold_119_23
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25882..27423)
DNA (1542bp) protein (514aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKX0_CLOSA
Displaying items 1-30 of 45 in total

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