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66_008_scaffold_177

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_177_1
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..98)
DNA (96bp) protein (32aa)
Elongation factor Tu n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PJC5_9BACE
translation elongation factor 1A (EF-1A/EF-Tu); K02358 elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=281689 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" source="Desulfuromonas acetoxidans DSM 684.;"
66_008_scaffold_177_2
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(149..2224)
DNA (2076bp) protein (692aa)
Elongation factor G n=4 Tax=Veillonella RepID=D1BP66_VEIPT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
translation elongation factor G; K02355 elongation factor G
66_008_scaffold_177_3
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(2240..2710)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=12 Tax=Veillonella RepID=D1BP67_VEIPT
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
66_008_scaffold_177_4
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2763..3137)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=13 Tax=Veillonella RepID=D1BP68_VEIPT
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
66_008_scaffold_177_5
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3214..3459)
DNA (246bp) protein (82aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 n=7 Tax=Veillonella RepID=T0UD46_9FIRM
ribosomal protein L7Ae-like protein; K07590 large subunit ribosomal protein L7A
Ribosomal protein L7ae family protein {ECO:0000313|EMBL:EFG23244.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
66_008_scaffold_177_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3815..5836
DNA (2022bp) protein (674aa)
Choline/carnitine/betaine transporter n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BP70_VEIPT
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:ACZ25177.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3); (Veillonella alcalescens).;"
choline/carnitine/betaine transporter; K02168 high-affinity choline transport protein
66_008_scaffold_177_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5961..10163)
DNA (4203bp) protein (1401aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' n=4 Tax=Veillonella RepID=T0SUW0_9FIRM
66_008_scaffold_177_8
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10193..14392)
DNA (4200bp) protein (1400aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=11 Tax=Veillonella RepID=D1BP72_VEIPT
66_008_scaffold_177_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14684..16099)
DNA (1416bp) protein (472aa)
fumarate lyase; K01744 aspartate ammonia-lyase [EC:4.3.1.1]
Aspartate ammonia-lyase n=2 Tax=Veillonella RepID=D6KQJ7_9FIRM
Putative aspartate ammonia-lyase {ECO:0000313|EMBL:EGL78350.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
66_008_scaffold_177_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16394..18034
DNA (1641bp) protein (547aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:EGL78346.1}; EC=2.4.1.109 {ECO:0000313|EMBL:EGL78346.1};; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
Dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KXG2_9FIRM
glycosyl transferase family protein
66_008_scaffold_177_11
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(18076..18444)
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQJ5_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
66_008_scaffold_177_12
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(18515..19012)
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=2 Tax=Veillonella RepID=D1BP76_VEIPT
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
66_008_scaffold_177_13
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19188..19898)
DNA (711bp) protein (237aa)
50S ribosomal protein L1 n=5 Tax=Veillonella RepID=D1BP77_VEIPT
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
66_008_scaffold_177_14
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(19975..20400)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQJ2_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
66_008_scaffold_177_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20510..21046)
DNA (537bp) protein (179aa)
Transcription termination/antitermination protein NusG n=3 Tax=Veillonella RepID=T0U5M9_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;"
NusG antitermination factor; K02601 transcriptional antiterminator NusG
66_008_scaffold_177_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21060..21281)
DNA (222bp) protein (74aa)
Protein translocase subunit SecE n=4 Tax=Veillonella parvula RepID=D1BP80_VEIPT
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-Sch12.;"
66_008_scaffold_177_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(21325..21474)
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=13 Tax=Veillonella RepID=D1BP81_VEIPT
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 17745.;"
66_008_scaffold_177_18
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21751..23988)
DNA (2238bp) protein (746aa)
nitric oxide reductase large subunit-like protein; K04561 nitric oxide reductase subunit B [EC:1.7.2.5]
Nitric oxide reductase large subunit-like protein n=5 Tax=Veillonella RepID=D1BP82_VEIPT
Nitric oxide reductase {ECO:0000313|EMBL:EFG23232.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
66_008_scaffold_177_19
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24324..24578)
DNA (255bp) protein (85aa)
Translation elongation factor Tu n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQK6_9FIRM
translation elongation factor Tu
Translation elongation factor Tu {ECO:0000313|EMBL:EFG23231.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Displaying 19 items

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