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66_008_scaffold_59

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Displaying items 1-30 of 71 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_59_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

226..834
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XHE2_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82249.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_59_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1000..1215)
DNA (216bp) protein (72aa)
2Fe-2S-binding domain-containing protein n=8 Tax=Clostridium perfringens RepID=H7CZP7_CLOPF
2Fe-2S-binding domain-containing protein
[2Fe-2S]-binding domain protein {ECO:0000313|EMBL:EDT15335.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_59_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1882..5001
DNA (3120bp) protein (1040aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R652_CLOPF
66_008_scaffold_59_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5046..5375)
DNA (330bp) protein (110aa)
Rhodanese-like domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CZP5_CLOPF
rhodanese-like domain-containing protein
Rhodanese-like domain protein {ECO:0000313|EMBL:EDT27184.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_008_scaffold_59_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5707..6705
DNA (999bp) protein (333aa)
Catabolite control protein A n=10 Tax=Clostridium perfringens RepID=H1CVL7_CLOPF
catabolite control protein A
Putative catabolite control protein A {ECO:0000313|EMBL:EDT15334.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_59_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6810..7238
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZV4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT72928.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_008_scaffold_59_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7242..7934
DNA (693bp) protein (231aa)
Membrane protein n=5 Tax=Clostridium perfringens RepID=Q0TMB5_CLOP1
membrane protein
Membrane protein {ECO:0000313|EMBL:EDT72877.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_008_scaffold_59_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8047..8679
DNA (633bp) protein (211aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CZP1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15841.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_59_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8868..10235
DNA (1368bp) protein (456aa)
MATE efflux family protein n=2 Tax=Clostridium perfringens RepID=B1RRZ9_CLOPF
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:EDT15336.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_59_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10275..10454)
DNA (180bp) protein (60aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CZN9_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15370.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_59_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10569..11147
DNA (579bp) protein (193aa)
Spore maturation protein A n=3 Tax=Clostridium perfringens RepID=H7CZN8_CLOPF
spmA; spore maturation protein A; K06373 spore maturation protein A
Spore maturation protein A {ECO:0000313|EMBL:EIA15838.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_59_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11117..11677
DNA (561bp) protein (187aa)
Spore maturation protein B n=3 Tax=Clostridium perfringens RepID=H7CZN7_CLOPF
spore maturation protein B; K06374 spore maturation protein B
Spore maturation protein B {ECO:0000313|EMBL:EIA15837.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_59_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12106..14703
DNA (2598bp) protein (866aa)
adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase; K04072 acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase n=8 Tax=Clostridium perfringens RepID=H7CZN6_CLOPF
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_59_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14851..16095
DNA (1245bp) protein (415aa)
pepP; xaa-pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Xaa-pro aminopeptidase {ECO:0000313|EMBL:EDT72860.1}; EC=3.4.11.9 {ECO:0000313|EMBL:EDT72860.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Xaa-pro aminopeptidase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZW1_CLOPF
66_008_scaffold_59_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16203..16541
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHF6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82235.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_59_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16681..18294
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHF7_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:BAB82234.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
hypothetical protein; K03688 ubiquinone biosynthesis protein
66_008_scaffold_59_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18721..20436
DNA (1716bp) protein (572aa)
Na+/H+ antiporter family protein n=6 Tax=Clostridium perfringens RepID=H7CZN2_CLOPF
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EIA15832.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Na+/H+ antiporter family protein
66_008_scaffold_59_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20476..20985)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVK4_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT15409.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_59_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21020..21601)
DNA (582bp) protein (194aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XHG0_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80618.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_008_scaffold_59_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22091..24028
DNA (1938bp) protein (646aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionine--tRNA ligase n=1 Tax=Clostridium perfringens F262 RepID=H7CZM9_CLOPF
66_008_scaffold_59_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24129..25673
DNA (1545bp) protein (515aa)
Methionyl-tRNA synthetase {ECO:0000313|EMBL:EDT24243.1}; EC=6.1.1.10 {ECO:0000313|EMBL:EDT24243.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10]
Methionyl-tRNA synthetase n=3 Tax=Clostridium perfringens RepID=H7CZM8_CLOPF
Suspect SCG annotation. See neighboring gene [66_008_scaffold_59_20].
66_008_scaffold_59_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25937..26617)
DNA (681bp) protein (227aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHR9_CLOPF
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDS80630.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
cyclic nucleotide-binding domain-containing protein
66_008_scaffold_59_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26719..28218
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFP4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27172.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
66_008_scaffold_59_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28237..29007
DNA (771bp) protein (257aa)
hydrolase, TatD family; K03424 TatD DNase family protein [EC:3.1.21.-]
Hydrolase, TatD family protein n=7 Tax=Clostridium perfringens RepID=H7CZM5_CLOPF
Hydrolase, TatD family protein {ECO:0000313|EMBL:EIA15825.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_59_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29251..30273
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XHG6_CLOPE
hypothetical protein
3D/G5 domain protein {ECO:0000313|EMBL:EDT27175.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_008_scaffold_59_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30414..30962
DNA (549bp) protein (183aa)
primase-like protein; K05985 ribonuclease M5 [EC:3.1.26.8]
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Ribonuclease M5 n=3 Tax=Clostridium perfringens RepID=Q8XHG7_CLOPE
66_008_scaffold_59_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


30974..31831
DNA (858bp) protein (286aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
Ribosomal RNA small subunit methyltransferase A n=8 Tax=Clostridium perfringens RepID=RSMA_CLOP1
66_008_scaffold_59_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31931..33541
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHG9_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:BAB82222.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
hypothetical protein
66_008_scaffold_59_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33672..34262
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMD8_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86907.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_59_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34365..35135
DNA (771bp) protein (257aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-]
Prolipoprotein diacylglyceryl transferase 2 {ECO:0000255|HAMAP-Rule:MF_01147}; EC=2.4.99.- {ECO:0000255|HAMAP-Rule:MF_01147};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Prolipoprotein diacylglyceryl transferase 2 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=LGT2_CLOPE
Displaying items 1-30 of 71 in total

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