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66_008_scaffold_94

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_94_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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58..261
DNA (204bp) protein (68aa)
Heavy metal binding protein n=9 Tax=Clostridium perfringens RepID=Q0TNG1_CLOP1
heavy metal binding protein
Heavy metal binding protein {ECO:0000313|EMBL:EDT15561.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_94_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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407..1543
DNA (1137bp) protein (379aa)
Ribosomal protein S1 family n=3 Tax=Clostridium perfringens RepID=Q0TNG2_CLOP1
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
Ribosomal protein S1 family {ECO:0000313|EMBL:EDT25274.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_008_scaffold_94_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1947..3371)
DNA (1425bp) protein (475aa)
pyk; pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
Pyruvate kinase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTD0_CLOPF
66_008_scaffold_94_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3504..4955
DNA (1452bp) protein (484aa)
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:EDT25305.1}; EC=3.4.13.- {ECO:0000313|EMBL:EDT25305.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
pepD; aminoacyl-histidine dipeptidase; K01270 dipeptidase D [EC:3.4.13.-]
Aminoacyl-histidine dipeptidase n=2 Tax=Clostridium perfringens RepID=B1BRX7_CLOPF
66_008_scaffold_94_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5269..6087
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UYV7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT73252.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_008_scaffold_94_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6349..7152
DNA (804bp) protein (268aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XIH3_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81852.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_94_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7378..7956
DNA (579bp) protein (193aa)
Maf-like protein maf n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRY0_CLOPF
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
maf; Maf-like protein; K06287 septum formation protein
66_008_scaffold_94_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8003..8719
DNA (717bp) protein (239aa)
UPF0758 protein CPE2144 n=5 Tax=Clostridium perfringens RepID=Y2144_CLOPE
radC; DNA repair protein RadC; K03630 DNA repair protein RadC
UPF0758 protein CPE2144; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_94_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8706..9734
DNA (1029bp) protein (343aa)
Rod shape-determining protein MreB n=10 Tax=Clostridium perfringens RepID=H7CYG7_CLOPF
mreB; rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins
Rod shape-determining protein MreB {ECO:0000313|EMBL:EIA16345.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_94_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9738..10589
DNA (852bp) protein (284aa)
Cell shape-determining protein MreC n=8 Tax=Clostridium perfringens RepID=Q0TNH0_CLOP1
mreC; rod shape-determining protein MreC; K03570 rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_94_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10605..11102
DNA (498bp) protein (166aa)
Rod shape-determining protein MreD n=4 Tax=Clostridium perfringens RepID=B1BKF4_CLOPF
Rod shape-determining protein MreD {ECO:0000313|EMBL:EDT15578.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
mreD; rod shape-determining protein MreD; K03571 rod shape-determining protein MreD
66_008_scaffold_94_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11111..14188
DNA (3078bp) protein (1026aa)
Putative penicillin-binding protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR41_CLOPS
Putative penicillin-binding protein {ECO:0000313|EMBL:ABG87343.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
penicillin-binding protein dimerisation domain-contain protein
66_008_scaffold_94_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14435..15070
DNA (636bp) protein (212aa)
Probable septum site-determining protein MinC n=11 Tax=Clostridium perfringens RepID=MINC_CLOP1
minC; septum formation inhibitor; K03610 septum site-determining protein MinC
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_94_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15099..15896
DNA (798bp) protein (266aa)
Site-determining protein n=11 Tax=Clostridium perfringens RepID=H7CYG2_CLOPF
minD; septum site-determining protein MinD; K03609 septum site-determining protein MinD
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_008_scaffold_94_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15907..16179
DNA (273bp) protein (91aa)
Cell division topological specificity factor n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=MINE_CLOPS
minE; cell division topological specificity factor MinE; K03608 cell division topological specificity factor
Cell division topological specificity factor {ECO:0000255|HAMAP-Rule:MF_00262}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_94_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16328..17452
DNA (1125bp) protein (375aa)
Cell cycle protein FtsW n=7 Tax=Clostridium perfringens RepID=H7CYG0_CLOPF
cell cycle protein FtsW; K05837 rod shape determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:EDT15553.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_94_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17604..18464
DNA (861bp) protein (287aa)
M23 peptidase domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLS5_CLOPF
M23 peptidase domain protein {ECO:0000313|EMBL:EDT15641.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
M23 peptidase domain-containing protein
66_008_scaffold_94_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18443..19297
DNA (855bp) protein (285aa)
M50 family peptidase (EC:3.4.24.-); K01417 [EC:3.4.24.-]
M50 family peptidase n=3 Tax=Clostridium perfringens RepID=H7CYF8_CLOPF
M50 family peptidase {ECO:0000313|EMBL:EIA16336.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_94_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19429..21282
DNA (1854bp) protein (618aa)
Radical SAM domain protein n=3 Tax=Clostridium perfringens RepID=Q0TNH9_CLOP1
Uncharacterized protein {ECO:0000313|EMBL:BAB81839.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
radical SAM domain-containing protein
66_008_scaffold_94_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21266..21967
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR49_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87684.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_94_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21984..23426
DNA (1443bp) protein (481aa)
ribonuclease; K08301 ribonuclease G [EC:3.1.26.-]
Ribonuclease, Rne/Rng family n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR50_CLOPS
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ABG86962.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_94_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23552..23863
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=10 Tax=Clostridium perfringens RepID=RL21_CLOP1
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_94_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23873..24244
DNA (372bp) protein (124aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q0SR52_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87268.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_94_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24248..24550
DNA (303bp) protein (101aa)
50S ribosomal protein L27 n=10 Tax=Clostridium perfringens RepID=RL27_CLOP1
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_94_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24717..26003
DNA (1287bp) protein (429aa)
GTPase Obg n=7 Tax=Clostridium perfringens RepID=OBG_CLOP1
obgE; GTPase ObgE; K03979 GTP-binding protein
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_94_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26021..26323
DNA (303bp) protein (101aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=Q8XIJ3_CLOPE
putative RNA-binding protein; K07574 RNA-binding protein
Putative RNA-binding protein {ECO:0000313|EMBL:EDT15284.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_94_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26325..26933
DNA (609bp) protein (203aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Probable nicotinate-nucleotide adenylyltransferase n=8 Tax=Clostridium perfringens RepID=NADD_CLOP1
66_008_scaffold_94_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26936..27505
DNA (570bp) protein (190aa)
HD domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR57_CLOPS
HD domain-containing protein
HD domain protein {ECO:0000313|EMBL:ABG87828.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_94_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27528..28850
DNA (1323bp) protein (441aa)
Cell envelope-related transcriptional attenuator domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR58_CLOPS
transcription regulator LytR-like protein
Cell envelope-related transcriptional attenuator domain protein {ECO:0000313|EMBL:ABG85905.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_94_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28838..29734
DNA (897bp) protein (299aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase, RluA family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLV3_CLOPF
Displaying items 1-30 of 46 in total

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