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66_008_scaffold_113

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Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_113_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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279..1604
DNA (1326bp) protein (442aa)
FolC bifunctional protein {ECO:0000313|EMBL:EDT26564.1}; EC=6.3.2.12 {ECO:0000313|EMBL:EDT26564.1};; EC=6.3.2.17 {ECO:0000313|EMBL:EDT26564.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
FolC bifunctional protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHM7_CLOPF
66_008_scaffold_113_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1715..3274
DNA (1560bp) protein (520aa)
Voltage-gated chloride channel family protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V015_CLOPF
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:EDT16228.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
66_008_scaffold_113_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3387..3881)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ45_CLOPE
hypothetical protein; K09705 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81622.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_113_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4007..4648
DNA (642bp) protein (214aa)
Probable hemolysin III n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ46_CLOPE
hlyE; hemolysin III; K11068 hemolysin III
Probable hemolysin III {ECO:0000313|EMBL:BAB81621.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_113_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4703..6127)
DNA (1425bp) protein (475aa)
Cell envelope-related transcriptional attenuator domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHN1_CLOPF
Cell envelope-related transcriptional attenuator domain protein {ECO:0000313|EMBL:EDT26570.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
cell envelope-related function transcriptional attenuator
66_008_scaffold_113_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6299..7405)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XJ48_CLOPE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT16266.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_113_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7471..8001)
DNA (531bp) protein (177aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CX45_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS80389.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_008_scaffold_113_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8109..8999
DNA (891bp) protein (297aa)
Polysaccharide deacetylase family protein n=3 Tax=Clostridium perfringens RepID=Q0TP49_CLOP1
polysaccharide deacetylase
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EDT25306.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_008_scaffold_113_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9001..9657
DNA (657bp) protein (219aa)
Single-stranded DNA-binding protein n=8 Tax=Clostridium perfringens RepID=H7CX43_CLOPF
single-stranded DNA-binding protein
Probable single stranded binding protein {ECO:0000313|EMBL:BAB81616.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_113_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9707..10417)
DNA (711bp) protein (237aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023632};; Tetrahydrodipicolinate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase n=8 Tax=Clostridium perfringens RepID=DAPH_CLOP1
66_008_scaffold_113_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10611..11147
DNA (537bp) protein (179aa)
cob(I)alamin adenosyltransferase; K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=7 Tax=Clostridium perfringens RepID=H1CSP0_CLOPF
Putative cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EDS80332.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_008_scaffold_113_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11147..12289
DNA (1143bp) protein (381aa)
patA; asparate aminotransferase; K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
Probable asparate aminotransferase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ54_CLOPE
Probable asparate aminotransferase {ECO:0000313|EMBL:BAB81613.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_113_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12585..13349)
DNA (765bp) protein (255aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
dapB; dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIV7_CLOPF
66_008_scaffold_113_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13422..14297)
DNA (876bp) protein (292aa)
dapA; dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=DAPA_CLOPE
66_008_scaffold_113_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14322..15299)
DNA (978bp) protein (326aa)
asd; aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XJ57_CLOPE
66_008_scaffold_113_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15501..15773
DNA (273bp) protein (91aa)
Small acid-soluble spore protein beta n=10 Tax=Clostridium perfringens RepID=H7CX36_CLOPF
small acid-soluble spore protein beta
Small acid-soluble spore protein beta {ECO:0000313|EMBL:EIA16750.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_113_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15840..16562
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TP58_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87433.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_113_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16578..17537
DNA (960bp) protein (320aa)
33 kDa chaperonin n=9 Tax=Clostridium perfringens RepID=HSLO_CLOP1
hslO; Hsp33-like chaperonin; K04083 molecular chaperone Hsp33
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_113_trna_1
unknown

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17598..17670
DNA (73bp)
transferRNA Phe
66_008_scaffold_113_trna_2
unknown

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17679..17750
DNA (72bp)
transferRNA Gly
66_008_scaffold_113_trna_3
unknown

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17757..17827
DNA (71bp)
transferRNA Gly
66_008_scaffold_113_trna_4
unknown

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17836..17907
DNA (72bp)
transferRNA Cys
66_008_scaffold_113_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18018..18395)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1R332_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25302.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_008_scaffold_113_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18694..19248
DNA (555bp) protein (185aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XJ62_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81605.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_113_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19414..19968
DNA (555bp) protein (185aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CXU0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16745.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_113_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20097..21077)
DNA (981bp) protein (327aa)
BadF/BadG/BcrA/BcrD ATPase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHP8_CLOPF
BadF/BadG/BcrA/BcrD ATPase family protein {ECO:0000313|EMBL:EDT26519.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
BadF/BadG/BcrA/BcrD ATPase
66_008_scaffold_113_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21332..22027)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIW7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS80340.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
66_008_scaffold_113_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22162..23040
DNA (879bp) protein (293aa)
Putative sporulation protein YtxC n=3 Tax=Clostridium perfringens RepID=B1BIW8_CLOPF
Putative sporulation protein YtxC {ECO:0000313|EMBL:EDS80228.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
sporulation protein YtxC
66_008_scaffold_113_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23322..23843
DNA (522bp) protein (174aa)
Translation initiation factor IF-3 n=5 Tax=Clostridium perfringens RepID=H7CXT6_CLOPF
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3
66_008_scaffold_113_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23865..24062
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=9 Tax=Clostridium perfringens RepID=RL35_CLOP1
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Displaying items 1-30 of 44 in total

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