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66_008_scaffold_179

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_179_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(156..1073)
DNA (918bp) protein (306aa)
Polysaccharide deacetylase family protein n=4 Tax=Clostridium perfringens RepID=H7CTS5_CLOPF
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EDT13769.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
polysaccharide deacetylase
66_008_scaffold_179_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1299..1709)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNZ4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT71625.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_008_scaffold_179_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2018..2392)
DNA (375bp) protein (125aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CTS3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT71603.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_008_scaffold_179_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2565..3476)
DNA (912bp) protein (304aa)
PTS system, mannose/fructose/sorbose family, IID component n=6 Tax=Clostridium perfringens RepID=B1BFN1_CLOPF
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:EDT28368.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
PTS system mannose/fructose/sorbose family transporter subunit IID; K02796 PTS system, mannose-specific IID component
66_008_scaffold_179_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3496..4299)
DNA (804bp) protein (268aa)
PTS system mannose-specific transporter subunit IIC n=7 Tax=Clostridium perfringens RepID=H7CTS1_CLOPF
PTS system, mannose/fructose/sorbose family, IIC component; K02795 PTS system, mannose-specific IIC component
PTS system mannose-specific transporter subunit IIC {ECO:0000313|EMBL:EIA18073.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_179_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4350..5330)
DNA (981bp) protein (327aa)
PTS system; K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69]; K02794 PTS system, mannose-specific IIB component [EC:2.7.1.69]
PTS system n=6 Tax=Clostridium perfringens RepID=Q8XM69_CLOPE
PTS system {ECO:0000313|EMBL:BAB80527.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_179_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5646..6485)
DNA (840bp) protein (280aa)
Cof-like hydrolase, HAD-superfamily, subfamily IIB n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUS9_CLOPS
HAD-superfamily cof-like hydrolase; K07024
Cof-like hydrolase, HAD-superfamily, subfamily IIB {ECO:0000313|EMBL:ABG86884.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_179_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6631..7539)
DNA (909bp) protein (303aa)
ddl; D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4]
D-alanine--D-alanine ligase B {ECO:0000255|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000255|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase B {ECO:0000255|HAMAP-Rule:MF_00047}; D-alanylalanine synthetaseB {ECO:0000255|HAMAP-Rule:MF_00047}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
D-alanine--D-alanine ligase B n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=DDLB_CLOPE
66_008_scaffold_179_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7740..11123)
DNA (3384bp) protein (1128aa)
Endo-beta-N-acetylglucosaminidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XM72_CLOPE
Endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:BAB80524.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
endo-beta-N-acetylglucosaminidase
66_008_scaffold_179_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11537..11863
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUT1_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87639.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_179_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12075..12392)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R4M6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT24773.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
66_008_scaffold_179_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12385..12600)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RN21_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18066.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
66_008_scaffold_179_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12678..13166)
DNA (489bp) protein (163aa)
GNAT family acetyltransferase; K03825 putative acetyltransferase [EC:2.3.1.-]
Acetyltransferase, GNAT family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BYC9_CLOPF
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT13297.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_008_scaffold_179_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13478..14260)
DNA (783bp) protein (261aa)
fhuC; ferrichrome ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Putative ferrichrome ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUT5_CLOPS
Putative ferrichrome ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABG86628.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_179_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14325..15338)
DNA (1014bp) protein (338aa)
Putative ferrichrome ABC transporter, permease protein FhuG n=3 Tax=Clostridium perfringens RepID=Q0TSY0_CLOP1
ferrichrome ABC transporter permease FhuG; K02015 iron complex transport system permease protein
Putative ferrichrome ABC transporter, permease protein FhuG {ECO:0000313|EMBL:EDT24769.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_008_scaffold_179_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15342..16355)
DNA (1014bp) protein (338aa)
Putative ferrichrome ABC transporter, permease protein FhuB n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RN25_CLOPF
fhuB; iron compound ABC transporter permease; K02015 iron complex transport system permease protein
Probable ferrichrome ABC transporter {ECO:0000313|EMBL:BAB80517.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_179_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16454..17443)
DNA (990bp) protein (330aa)
Iron compound ABC transporter, iron compound-binding protein n=4 Tax=Clostridium perfringens RepID=H7CTQ9_CLOPF
iron ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein
Iron compound ABC transporter, iron compound-binding protein {ECO:0000313|EMBL:EIA18061.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_179_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17661..18281
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUT9_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86688.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_179_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18319..18864)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUU0_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87159.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_008_scaffold_179_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19184..19687
DNA (504bp) protein (168aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CTQ6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18058.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_179_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19966..21249)
DNA (1284bp) protein (428aa)
UPF0597 protein CJD_0956 n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V3K0_CLOPF
UPF0597 protein CJD_0956 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
66_008_scaffold_179_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21494..23326)
DNA (1833bp) protein (611aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNX3_CLOPF
Glycosyl hydrolase, family 13 {ECO:0000313|EMBL:EDT71598.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
cyclomaltodextrinase
Displaying 22 items

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