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66_008_scaffold_247

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_247_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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365..832
DNA (468bp) protein (156aa)
Putative membrane protein n=5 Tax=Clostridium perfringens RepID=Q0SSU7_CLOPS
membrane flanked domain-containing protein; K09167 hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT26919.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_008_scaffold_247_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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842..2260
DNA (1419bp) protein (473aa)
Putative membrane protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJK0_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDS80020.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein; K08981 putative membrane protein
66_008_scaffold_247_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2348..4543
DNA (2196bp) protein (732aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
topB; DNA topoisomerase III (EC:5.99.1.2); K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SSU9_CLOPS
66_008_scaffold_247_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4926..5888
DNA (963bp) protein (321aa)
Probable endo-1,4-beta-xylanase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XK96_CLOPE
endo-1,4-beta-xylanase
Probable endo-1,4-beta-xylanase {ECO:0000313|EMBL:BAB81213.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_008_scaffold_247_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5939..7522)
DNA (1584bp) protein (528aa)
ABC transporter, ATP-binding protein n=6 Tax=Clostridium perfringens RepID=Q0TQ97_CLOP1
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT13950.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter ATP-binding protein
66_008_scaffold_247_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7709..9007
DNA (1299bp) protein (433aa)
Uracil-xanthine permease n=3 Tax=Clostridium perfringens RepID=H1CR94_CLOPF
Putative uracil permease {ECO:0000313|EMBL:EDS80019.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
uracil transporter; K02824 uracil permease
66_008_scaffold_247_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9433..10446
DNA (1014bp) protein (338aa)
3D/G5 domain-containing protein n=5 Tax=Clostridium perfringens RepID=H7CWN2_CLOPF
hypothetical protein
3D/G5 domain protein {ECO:0000313|EMBL:EDT26893.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_008_scaffold_247_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10670..10957
DNA (288bp) protein (96aa)
UPF0045 protein CPE1503 n=7 Tax=Clostridium perfringens RepID=Y1503_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16782.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_247_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11054..12067
DNA (1014bp) protein (338aa)
N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase domain-containing protein n=1 Tax=Clostridium perfringens F262 RepID=H7CWN0_CLOPF
N-acetylmuramoyl-L-alanine amidase domain-containing protein {ECO:0000313|EMBL:EIA16781.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_008_scaffold_247_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12206..12916
DNA (711bp) protein (237aa)
LytTr family DNA-binding response regulator n=8 Tax=Clostridium perfringens RepID=H7CWM9_CLOPF
LytTr family DNA-binding response regulator
DNA-binding response regulator, LytTr family {ECO:0000313|EMBL:EDS81082.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_008_scaffold_247_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12910..14232
DNA (1323bp) protein (441aa)
Sensor histidine kinase VirS n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGJ0_CLOPF
Sensor histidine kinase VirS {ECO:0000313|EMBL:EDS81083.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
virS; sensor histidine kinase VirS
Displaying 11 items

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