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66_008_scaffold_47

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Displaying items 1-30 of 87 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_47_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2..172)
DNA (171bp) protein (57aa)
UPI0003D5CDF6 related cluster n=1 Tax=unknown RepID=UPI0003D5CDF6
RND membrane fusion protein {ECO:0000313|EMBL:ETI86749.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_008_scaffold_47_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(336..1853)
DNA (1518bp) protein (506aa)
UPI0003D5C749 related cluster n=1 Tax=unknown RepID=UPI0003D5C749
Lysine-specific permease {ECO:0000313|EMBL:ETI86750.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
lysine-specific permease; K11733 lysine-specific permease
66_008_scaffold_47_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2212..4128)
DNA (1917bp) protein (639aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
DNA gyrase subunit beta; K02470 DNA gyrase subunit B [EC:5.99.1.3]
UPI0003D5B039 related cluster n=1 Tax=unknown RepID=UPI0003D5B039
66_008_scaffold_47_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4290..5129)
DNA (840bp) protein (280aa)
UPI0003D6336E related cluster n=1 Tax=unknown RepID=UPI0003D6336E
Uncharacterized protein {ECO:0000313|EMBL:ETI86752.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
66_008_scaffold_47_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5119..6192)
DNA (1074bp) protein (358aa)
UPI0003D59835 related cluster n=1 Tax=unknown RepID=UPI0003D59835
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
DNA replication and repair protein recF; K03629 DNA replication and repair protein RecF
66_008_scaffold_47_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6189..6407)
DNA (219bp) protein (73aa)
UPI0003D659BB related cluster n=1 Tax=unknown RepID=UPI0003D659BB
S4 protein {ECO:0000313|EMBL:ETI86754.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
S4 domain-containing protein
66_008_scaffold_47_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6409..7518)
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
UPI0003D6870A related cluster n=1 Tax=unknown RepID=UPI0003D6870A
66_008_scaffold_47_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7750..9231)
DNA (1482bp) protein (494aa)
UPI0003D5D771 related cluster n=1 Tax=unknown RepID=UPI0003D5D771
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein
66_008_scaffold_47_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9431..10771)
DNA (1341bp) protein (447aa)
UPI0003D631AC related cluster n=1 Tax=unknown RepID=UPI0003D631AC
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:ETI86757.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
branched-chain amino acid transport system II carrier protein; K03311 branched-chain amino acid:cation transporter, LIVCS family
66_008_scaffold_47_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11202..11549
DNA (348bp) protein (116aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
UPI0003D69A80 related cluster n=1 Tax=unknown RepID=UPI0003D69A80
66_008_scaffold_47_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11784..12470
DNA (687bp) protein (229aa)
UPI0003D614BB related cluster n=1 Tax=unknown RepID=UPI0003D614BB
Uncharacterized protein {ECO:0000313|EMBL:ETI86759.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
OxaA-like protein; K03217 preprotein translocase subunit YidC
66_008_scaffold_47_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12467..13387
DNA (921bp) protein (307aa)
UPI0003D6315A related cluster n=1 Tax=unknown RepID=UPI0003D6315A
Uncharacterized protein {ECO:0000313|EMBL:KGF11944.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
R3H domain protein; K06346 spoIIIJ-associated protein
66_008_scaffold_47_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13438..14820
DNA (1383bp) protein (461aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
UPI0003D61119 related cluster n=1 Tax=unknown RepID=UPI0003D61119
66_008_scaffold_47_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14831..16717
DNA (1887bp) protein (629aa)
UPI0003D60D8D related cluster n=1 Tax=unknown RepID=UPI0003D60D8D
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
glucose inhibited division protein A; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
66_008_scaffold_47_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16707..17441
DNA (735bp) protein (245aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
rsmG; putative ribosomal RNA small subunit methyltransferase G; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
UPI0003D5BC29 related cluster n=1 Tax=unknown RepID=UPI0003D5BC29
66_008_scaffold_47_16
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17484..18380
DNA (897bp) protein (299aa)
UPI0003D62DAA related cluster n=1 Tax=unknown RepID=UPI0003D62DAA
Polyphosphate:nucleotide phosphotransferase {ECO:0000313|EMBL:ETI86764.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
polyphosphate:nucleotide phosphotransferase
66_008_scaffold_47_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18504..19265
DNA (762bp) protein (254aa)
UPI0003D66E97 related cluster n=1 Tax=unknown RepID=UPI0003D66E97
Uncharacterized protein {ECO:0000313|EMBL:ETI86765.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein
66_008_scaffold_47_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19258..20133
DNA (876bp) protein (292aa)
UPI0003D66769 related cluster n=1 Tax=unknown RepID=UPI0003D66769
SpoOJ protein {ECO:0000313|EMBL:ETI86766.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family
66_008_scaffold_47_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20159..20674
DNA (516bp) protein (172aa)
UPI0003D5A418 related cluster n=1 Tax=unknown RepID=UPI0003D5A418
Uncharacterized protein {ECO:0000313|EMBL:ETI86767.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
66_008_scaffold_47_20
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20671..21561
DNA (891bp) protein (297aa)
UPI0003D5AAC8 related cluster n=1 Tax=unknown RepID=UPI0003D5AAC8
Uncharacterized protein {ECO:0000313|EMBL:KGF11937.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
peptidase
66_008_scaffold_47_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22242..23423
DNA (1182bp) protein (394aa)
UPI0003D62AE4 related cluster n=1 Tax=unknown RepID=UPI0003D62AE4
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ETI88169.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
66_008_scaffold_47_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23454..24626
DNA (1173bp) protein (391aa)
UPI0003D6138C related cluster n=1 Tax=unknown RepID=UPI0003D6138C
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ETI88170.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
branched chain amino acid ABC transporter amino acid-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
66_008_scaffold_47_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24696..25589
DNA (894bp) protein (298aa)
UPI0003D5E4E9 related cluster n=1 Tax=unknown RepID=UPI0003D5E4E9
Inner-membrane translocator {ECO:0000313|EMBL:ETI88171.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
66_008_scaffold_47_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25589..26557
DNA (969bp) protein (323aa)
UPI0003D62694 related cluster n=1 Tax=unknown RepID=UPI0003D62694
Inner-membrane translocator {ECO:0000313|EMBL:ETI88172.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
livM; inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
66_008_scaffold_47_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26535..27299
DNA (765bp) protein (255aa)
UPI0003D66480 related cluster n=1 Tax=unknown RepID=UPI0003D66480
ABC transporter related protein {ECO:0000313|EMBL:ETI88173.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-)
66_008_scaffold_47_26
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27301..28005
DNA (705bp) protein (235aa)
UPI0003D64885 related cluster n=1 Tax=unknown RepID=UPI0003D64885
ABC transporter related protein {ECO:0000313|EMBL:ETI88174.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
66_008_scaffold_47_27
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28053..29024)
DNA (972bp) protein (324aa)
UPI0003D5F443 related cluster n=1 Tax=unknown RepID=UPI0003D5F443
Uncharacterized protein {ECO:0000313|EMBL:KGF11929.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
transporter; K07088
66_008_scaffold_47_28
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29197..30222
DNA (1026bp) protein (342aa)
L,L-diaminopimelate aminotransferase (EC:2.6.1.83); K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83]
UPI0003D63C37 related cluster n=1 Tax=unknown RepID=UPI0003D63C37
Uncharacterized protein {ECO:0000313|EMBL:KGF11928.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
66_008_scaffold_47_29
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30242..31348
DNA (1107bp) protein (369aa)
UPI0003D693EE related cluster n=1 Tax=unknown RepID=UPI0003D693EE
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
GTP-binding protein YchF; K06942
66_008_scaffold_47_trna_1
unknown

Not on your lists

31414..31486
DNA (73bp)
transferRNA Arg
Displaying items 1-30 of 87 in total

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