ggKbase home page

66_008_scaffold_115

Search features with annotation key words

Displaying items 1-30 of 38 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_115_1
unknown

Not on your lists

comp(3..1016)
DNA (1014bp) protein (338aa)

This feature has no annotations

66_008_scaffold_115_2
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1013..1543)
DNA (531bp) protein (177aa)
UPI0003D65F6A related cluster n=1 Tax=unknown RepID=UPI0003D65F6A
Uncharacterized protein {ECO:0000313|EMBL:KGF12385.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UvrB/UvrC protein
66_008_scaffold_115_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1558..1986)
DNA (429bp) protein (143aa)
UPI0003D67784 related cluster n=1 Tax=unknown RepID=UPI0003D67784
Uncharacterized protein {ECO:0000313|EMBL:ETI86134.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
CtsR family transcriptional regulator; K03708 transcriptional regulator CtsR
66_008_scaffold_115_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2119..2613
DNA (495bp) protein (165aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50]
UPI0003D680E2 related cluster n=1 Tax=unknown RepID=UPI0003D680E2
66_008_scaffold_115_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2656..4260)
DNA (1605bp) protein (535aa)
UPI0003D610AD related cluster n=1 Tax=unknown RepID=UPI0003D610AD
DAK2 protein {ECO:0000313|EMBL:ETI86132.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
yloV; DAK2 domain fusion protein YloV
66_008_scaffold_115_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4250..5113)
DNA (864bp) protein (288aa)
UPI0003D5DA6A related cluster n=1 Tax=unknown RepID=UPI0003D5DA6A
DegV family protein {ECO:0000313|EMBL:ETI86131.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
degV family protein
66_008_scaffold_115_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5204..5542)
DNA (339bp) protein (113aa)
UPI0003D68708 related cluster n=1 Tax=unknown RepID=UPI0003D68708
Uncharacterized protein {ECO:0000313|EMBL:ETI86130.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
66_008_scaffold_115_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5553..6506)
DNA (954bp) protein (318aa)
esterase/lipase (EC:3.1.1.-); K01066 esterase / lipase [EC:3.1.1.-]
UPI0003D62C38 related cluster n=1 Tax=unknown RepID=UPI0003D62C38
Uncharacterized protein {ECO:0000313|EMBL:KGF12389.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
66_008_scaffold_115_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6503..8854)
DNA (2352bp) protein (784aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
UPI0003D62233 related cluster n=1 Tax=unknown RepID=UPI0003D62233
MutS2 family protein; K07456 DNA mismatch repair protein MutS2
66_008_scaffold_115_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8854..11235)
DNA (2382bp) protein (794aa)
peptidase U32 (EC:3.4.-.-); K08303 putative protease [EC:3.4.-.-]
UPI0003D65E0B related cluster n=1 Tax=unknown RepID=UPI0003D65E0B
Peptidase, U32 family {ECO:0000313|EMBL:ETI86127.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_008_scaffold_115_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(11340..13055)
DNA (1716bp) protein (572aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
proS; putative prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15]
UPI0003D62869 related cluster n=1 Tax=unknown RepID=UPI0003D62869
66_008_scaffold_115_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13052..14125)
DNA (1074bp) protein (358aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
UPI0003D5A67C related cluster n=1 Tax=unknown RepID=UPI0003D5A67C
66_008_scaffold_115_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14140..15177)
DNA (1038bp) protein (346aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
RIP metalloprotease RseP; K11749 regulator of sigma E protease [EC:3.4.24.-]
UPI0003D5B4F9 related cluster n=1 Tax=unknown RepID=UPI0003D5B4F9
66_008_scaffold_115_14
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15190..16347)
DNA (1158bp) protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; N
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
UPI0003D5AED7 related cluster n=1 Tax=unknown RepID=UPI0003D5AED7
66_008_scaffold_115_15
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16344..17159)
DNA (816bp) protein (272aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
UPI0003D60AB4 related cluster n=1 Tax=unknown RepID=UPI0003D60AB4
66_008_scaffold_115_16
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17162..17881)
DNA (720bp) protein (240aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
di-trans; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31]
UPI0003D65D04 related cluster n=1 Tax=unknown RepID=UPI0003D65D04
66_008_scaffold_115_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17865..18128)
DNA (264bp) protein (88aa)
UPI0003D696C5 related cluster n=1 Tax=unknown RepID=UPI0003D696C5
Uncharacterized protein {ECO:0000313|EMBL:ETI86120.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_008_scaffold_115_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18125..18682)
DNA (558bp) protein (186aa)
UPI0003D6679A related cluster n=1 Tax=unknown RepID=UPI0003D6679A
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ribosome recycling factor; K02838 ribosome recycling factor
66_008_scaffold_115_19
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18675..19406)
DNA (732bp) protein (244aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
pyrH; uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22]
UPI0003D591E9 related cluster n=1 Tax=unknown RepID=UPI0003D591E9
66_008_scaffold_115_20
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19459..20106)
DNA (648bp) protein (216aa)
UPI0003D668AA related cluster n=1 Tax=unknown RepID=UPI0003D668AA
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
elongation factor Ts; K02357 elongation factor Ts
66_008_scaffold_115_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(20140..20892)
DNA (753bp) protein (251aa)
UPI0003D63338 related cluster n=1 Tax=unknown RepID=UPI0003D63338
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2
66_008_scaffold_115_22
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21036..24617)
DNA (3582bp) protein (1194aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
DNA polymerase III; K03763 DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
UPI0003D5B169 related cluster n=1 Tax=unknown RepID=UPI0003D5B169
66_008_scaffold_115_23
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24635..26053)
DNA (1419bp) protein (473aa)
UPI0003D6563B related cluster n=1 Tax=unknown RepID=UPI0003D6563B
VanW-like protein {ECO:0000313|EMBL:ETI86114.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
von Willebrand factor A
66_008_scaffold_115_24
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26050..27009)
DNA (960bp) protein (320aa)
UPI0003D5FCD7 related cluster n=1 Tax=unknown RepID=UPI0003D5FCD7
Uncharacterized protein {ECO:0000313|EMBL:ETI86113.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_008_scaffold_115_25
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26972..29224)
DNA (2253bp) protein (751aa)
UPI0003D60130 related cluster n=1 Tax=unknown RepID=UPI0003D60130
Uncharacterized protein {ECO:0000313|EMBL:KGF12405.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC
66_008_scaffold_115_26
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29221..29772)
DNA (552bp) protein (184aa)
UPI0003D63D04 related cluster n=1 Tax=unknown RepID=UPI0003D63D04
Uncharacterized protein {ECO:0000313|EMBL:KGF12406.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
comEA; competence protein; K02237 competence protein ComEA
66_008_scaffold_115_27
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29848..31086
DNA (1239bp) protein (413aa)
peptidase M29 aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-]
UPI0003D5F341 related cluster n=1 Tax=unknown RepID=UPI0003D5F341
Uncharacterized protein {ECO:0000313|EMBL:KGF12407.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
66_008_scaffold_115_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31067..31969)
DNA (903bp) protein (301aa)
UPI0003D6993C related cluster n=1 Tax=unknown RepID=UPI0003D6993C
Transporter, drug/metabolite exporter {ECO:0000313|EMBL:ETI86108.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Permease of the drug/metabolite transporter (DMT) superfamily
66_008_scaffold_115_trna_1
unknown

Not on your lists

comp(32046..32119)
DNA (74bp)
transferRNA Val
66_008_scaffold_115_29
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32204..33454)
DNA (1251bp) protein (417aa)
UPI0003D5F051 related cluster n=1 Tax=unknown RepID=UPI0003D5F051
Aluminum resistance protein {ECO:0000313|EMBL:ETI86107.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
aluminum resistance protein
Displaying items 1-30 of 38 in total

View Taxonomy