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66_008_scaffold_258

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_258_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(597..1907)
DNA (1311bp) protein (437aa)
UPI0003D670E5 related cluster n=1 Tax=unknown RepID=UPI0003D670E5
Putrescine transporter {ECO:0000313|EMBL:KGF12260.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
amino acid permease; K03756 putrescine:ornithine antiporter
66_008_scaffold_258_2
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2438..3160
DNA (723bp) protein (241aa)
YjbE family integral membrane protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K915_9FIRM
YjbE family integral membrane protein {ECO:0000313|EMBL:EHR35567.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Membrane protein TerC, possibly involved in tellurium resistance
66_008_scaffold_258_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3181..3861
DNA (681bp) protein (227aa)
UPI0003D5F592 related cluster n=1 Tax=unknown RepID=UPI0003D5F592
Membrane protein TerC, possibly involved in tellurium resistance {ECO:0000313|EMBL:ETI86567.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Membrane protein TerC, possibly involved in tellurium resistance
66_008_scaffold_258_4
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3898..4662)
DNA (765bp) protein (255aa)
UPI0003D67E78 related cluster n=1 Tax=unknown RepID=UPI0003D67E78
L-allo-threonine dehydrogenase {ECO:0000313|EMBL:KGF12261.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
short-chain dehydrogenase/reductase SDR
66_008_scaffold_258_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4812..5603
DNA (792bp) protein (264aa)
UPI0003D5F1EB related cluster n=1 Tax=unknown RepID=UPI0003D5F1EB
Uncharacterized protein {ECO:0000313|EMBL:ETI87252.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
66_008_scaffold_258_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5600..6085
DNA (486bp) protein (162aa)
UPI0003D622B8 related cluster n=1 Tax=unknown RepID=UPI0003D622B8
Inner membrane protein yjiG {ECO:0000313|EMBL:ETI87253.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
nucleoside recognition domain-containing protein
66_008_scaffold_258_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6128..7297
DNA (1170bp) protein (390aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
isoaspartyl dipeptidase IadA (EC:3.4.19.5)
UPI0003D65764 related cluster n=1 Tax=unknown RepID=UPI0003D65764
66_008_scaffold_258_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7361..7795)
DNA (435bp) protein (145aa)
UPI0003D6302D related cluster n=1 Tax=unknown RepID=UPI0003D6302D
Uncharacterized protein {ECO:0000313|EMBL:ETI87255.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
66_008_scaffold_258_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8069..8986)
DNA (918bp) protein (306aa)
UPI0003D658A5 related cluster n=1 Tax=unknown RepID=UPI0003D658A5
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:ETI87256.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein
66_008_scaffold_258_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9001..9933)
DNA (933bp) protein (311aa)
UPI0003D67542 related cluster n=1 Tax=unknown RepID=UPI0003D67542
Ribose ABC transporter permease protein {ECO:0000313|EMBL:ETI87257.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
inner-membrane translocator; K10440 ribose transport system permease protein
66_008_scaffold_258_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9937..11418)
DNA (1482bp) protein (494aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
UPI0003D673B5 related cluster n=1 Tax=unknown RepID=UPI0003D673B5
Ribose transport ATP-binding protein rbsa {ECO:0000313|EMBL:ETI87258.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_008_scaffold_258_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11436..11831)
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
transport protein RbsD/FucU; K06726 D-ribose pyranase [EC:5.-.-.-]
UPI0003D5F361 related cluster n=1 Tax=unknown RepID=UPI0003D5F361
66_008_scaffold_258_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11833..12705)
DNA (873bp) protein (291aa)
rbsK; ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15]
UPI0003D68536 related cluster n=1 Tax=unknown RepID=UPI0003D68536
Ribokinase {ECO:0000313|EMBL:ETI87260.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
Displaying 13 items

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