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66_008_scaffold_267

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_008_scaffold_267_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..889
DNA (888bp) protein (296aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
tetraacyldisaccharide 4'-kinase; K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
UPI0003D66883 related cluster n=1 Tax=unknown RepID=UPI0003D66883
66_008_scaffold_267_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

871..1638
DNA (768bp) protein (256aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
UPI0003D6461E related cluster n=1 Tax=unknown RepID=UPI0003D6461E
66_008_scaffold_267_3
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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1616..2443
DNA (828bp) protein (276aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. I
2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
UPI0003D6369C related cluster n=1 Tax=unknown RepID=UPI0003D6369C
66_008_scaffold_267_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2440..3411
DNA (972bp) protein (324aa)
arabinose 5-phosphate isomerase; K06041 arabinose-5-phosphate isomerase [EC:5.3.1.13]
UPI0003D61308 related cluster n=1 Tax=unknown RepID=UPI0003D61308
Uncharacterized protein {ECO:0000313|EMBL:ETI85005.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_008_scaffold_267_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3411..3944
DNA (534bp) protein (178aa)
3-deoxy-manno-octulosonate-8-phosphatase (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
UPI0003D5B542 related cluster n=1 Tax=unknown RepID=UPI0003D5B542
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:ETI85004.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_008_scaffold_267_6
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3964..4881
DNA (918bp) protein (306aa)
lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
UPI0003D623A1 related cluster n=1 Tax=unknown RepID=UPI0003D623A1
Uncharacterized protein {ECO:0000313|EMBL:KGF12313.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
66_008_scaffold_267_7
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4878..5423
DNA (546bp) protein (182aa)
UPI0003D69382 related cluster n=1 Tax=unknown RepID=UPI0003D69382
Uncharacterized protein {ECO:0000313|EMBL:KGF12312.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein; K11719 lipopolysaccharide export system protein LptC
66_008_scaffold_267_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5420..6127
DNA (708bp) protein (236aa)
UPI0003D60D0A related cluster n=1 Tax=unknown RepID=UPI0003D60D0A
OstA-like protein {ECO:0000313|EMBL:ETI85001.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
OstA family protein
66_008_scaffold_267_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6129..6854
DNA (726bp) protein (242aa)
ABC transporter; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-]
UPI0003D5E7C2 related cluster n=1 Tax=unknown RepID=UPI0003D5E7C2
ABC transporter {ECO:0000313|EMBL:ETI85000.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_008_scaffold_267_10
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6906..7994
DNA (1089bp) protein (363aa)
UPI0003D69717 related cluster n=1 Tax=unknown RepID=UPI0003D69717
Permease {ECO:0000313|EMBL:KGF12309.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
Predicted permeases
66_008_scaffold_267_11
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8005..9189
DNA (1185bp) protein (395aa)
UPI0003D61352 related cluster n=1 Tax=unknown RepID=UPI0003D61352
Uncharacterized protein {ECO:0000313|EMBL:ETI84998.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein
66_008_scaffold_267_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9240..9677
DNA (438bp) protein (146aa)
UPI0003D5D518 related cluster n=1 Tax=unknown RepID=UPI0003D5D518
Uncharacterized protein {ECO:0000313|EMBL:KGF12307.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
66_008_scaffold_267_13
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9674..11101
DNA (1428bp) protein (476aa)
UPI0003D61EE7 related cluster n=1 Tax=unknown RepID=UPI0003D61EE7
APC family amino acid-polyamine-organocation transporter {ECO:0000313|EMBL:ETI84996.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
rocC; amino acid permease rocC
66_008_scaffold_267_trna_1
unknown

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11148..11221
DNA (74bp)
transferRNA Pro
66_008_scaffold_267_trna_2
unknown

Not on your lists

11228..11301
DNA (74bp)
transferRNA Arg
66_008_scaffold_267_14
unknown

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11406..11531
DNA (126bp) protein (42aa)

This feature has no annotations

66_008_scaffold_267_trna_3
unknown

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11526..11589
DNA (64bp)
transferRNA Pseudo
Displaying 17 items

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