ggKbase home page

66_010_scaffold_12_23

Organism: 66_010_Negativicoccus_succinicivorans_52_21

near complete RP 51 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 22894..24471

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8J0_CLOSW similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 523.0
  • Bit_score: 568
  • Evalue 6.10e-159
ABC transporter permease {ECO:0000313|EMBL:KGF11991.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 525.0
  • Bit_score: 994
  • Evalue 4.90e-287
glycine betaine ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 523.0
  • Bit_score: 568
  • Evalue 1.90e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridiales bacterium S5-A11 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1578
ATGAGCGGCTTTACCTCCTATGTCACCTCCAATTGGTCCTACATTCTTTCTCTTTTGTGGGAACATATCGAATTAACCGCCATCGCGGTCGCGATCTCGGTCCTCGTGGGCGTGCCGCTCGGGATTTTGATCTCGTACCGGCGCCAATTGCAATCGCCGGTGTTGCAATCGGCGAACATCATGCAGGCGATTCCGAGCATGGCGCTGTTGGGCTTCGCGATTCCGTTTTTCGGGATCGGTCGTCTGCCGGCGATTATCGTCGTTATTTTATACTCGCTGCTGCCGATTATTAAAAATACGTATACGGGCATTTCGCAAATCAGTCCGCAGATGCGTGAAGCGGCGGTCGGCATCGGTCTTTCGCGCTGGCAGGTATTGCGCAAAGTCGAATTGCCGCAGGCCTTGCCGGTCATCATGGCGGGCGTGCGCATCAGTTCGGTCACCGCGGTCGGCCTGATGACGATCGCGGCCTTCATCGGCGCGGGCGGCTTGGGTGATCTCGTCTTCGCCGGCATTCGCACCGTCGACAATAACATGATTCTCGCGGGCGCGATTCCCGCTTGTTTGTTGGCCTTGTCCGTTGATTATATCTTGGGTCGCGTCGAGCAGCTCGTCACGCCGATCGCCACCCAACTTTCGCCGACAACGGATCGTCAAGCGGTCATCGGCCGCCACCGTCGCTCCAAAATTCTGATCGCGTCGCTGGCGATTTTGCTCGTGCTCGGCGGCGGCTATGCCGGCATCCGACAAGCGTTCGCGCCGAAAGCCGATGTGGTCGTCGGAACGAAAGATTTTACCGAAAATATTTTAATGGGTCACATGATGGCGGAAATCATCGAAGATCATACCGGCCTGAACGTGGAACGACGCATCAACTTGGGCGGCACCAATGTCGCCTTTGAAGCGCTCAAGAGCAAGGAAATCGACCTTTATCTGGATTACACGGGCACGGTCTACGTTTCGCTTTTGAAAAACGAACCGATCAGCGACATGCAGCGCGTGTACGAAGAAGGTAAAGCGGGGCTGGCGCCGCTTTCCATCACCATGCTGCCTCAATACGCCTTCAATAACACGTACGCGCTCGCGGTACGCCCCGATTTCGCGGCCGCGCACAACCTGGAAACGATCAGCGATCTGCGCGCCGTCGCGTCGAATATGAATGTCGGCACGACGTTTGAATTCAAAAACCGTCCCGACGGTTTGAACGGCATGACGAAAACGTACGGTCTGCAGTTCGCCAACGCGCTCGGCATTGACAGCTCCTCGCGTTACATCGCCATTAACAATGATGAAGTCCAGGCGATCGACGCGTTCATGACCGACGGCCTTTTGAAGAAATTCAATCTGAAAGTGCTGGAAGACGATCGGCATTACTTCCCGCCGTACTACGCGACGCCGCTTTTGCGTACGGAAGTCGCCGAAGCGCATCCGGAAGTGGTGGACGCGCTGAATGAACTCGCGCCGCTCCTGACGGATGAAGTCATGCGCGAATTGAATTATAAAGTGGACGAAGAACGTCAGGATCCGGAAAAAGTGGCTCACGAGTTCCTCACTTCGCAAAACTTGTTGAAAAAGTAA
PROTEIN sequence
Length: 526
MSGFTSYVTSNWSYILSLLWEHIELTAIAVAISVLVGVPLGILISYRRQLQSPVLQSANIMQAIPSMALLGFAIPFFGIGRLPAIIVVILYSLLPIIKNTYTGISQISPQMREAAVGIGLSRWQVLRKVELPQALPVIMAGVRISSVTAVGLMTIAAFIGAGGLGDLVFAGIRTVDNNMILAGAIPACLLALSVDYILGRVEQLVTPIATQLSPTTDRQAVIGRHRRSKILIASLAILLVLGGGYAGIRQAFAPKADVVVGTKDFTENILMGHMMAEIIEDHTGLNVERRINLGGTNVAFEALKSKEIDLYLDYTGTVYVSLLKNEPISDMQRVYEEGKAGLAPLSITMLPQYAFNNTYALAVRPDFAAAHNLETISDLRAVASNMNVGTTFEFKNRPDGLNGMTKTYGLQFANALGIDSSSRYIAINNDEVQAIDAFMTDGLLKKFNLKVLEDDRHYFPPYYATPLLRTEVAEAHPEVVDALNELAPLLTDEVMRELNYKVDEERQDPEKVAHEFLTSQNLLKK*