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66_010_scaffold_12

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Displaying items 1-30 of 140 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_12_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(477..1967)
DNA (1491bp) protein (497aa)
Aldehyde dehydrogenase B n=1 Tax=Leptotrichia sp. oral taxon 215 str. W9775 RepID=U2QTX5_9FUSO
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGF12007.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
gamma-aminobutyraldehyde dehydrogenase
66_010_scaffold_12_2
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2172..3632)
DNA (1461bp) protein (487aa)
UPI0003D5E858 related cluster n=1 Tax=unknown RepID=UPI0003D5E858
Amino acid permease family protein {ECO:0000313|EMBL:ETI86887.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
amino acid transporter
66_010_scaffold_12_3
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3854..4420
DNA (567bp) protein (189aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89]
UPI0003D66CE0 related cluster n=1 Tax=unknown RepID=UPI0003D66CE0
66_010_scaffold_12_4
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(4460..5113)
DNA (654bp) protein (218aa)
UPI0003D6348B related cluster n=1 Tax=unknown RepID=UPI0003D6348B
Uncharacterized protein {ECO:0000313|EMBL:ETI88317.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_010_scaffold_12_5
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5113..6093)
DNA (981bp) protein (327aa)
UPI0003D60614 related cluster n=1 Tax=unknown RepID=UPI0003D60614
Hydrid cluster protein-associated redox disulfide protein {ECO:0000313|EMBL:ETI88318.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
nitrite and sulfite reductase 4Fe-4S domain-containing protein
66_010_scaffold_12_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6110..6673)
DNA (564bp) protein (188aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
msrB; methionine-R-sulfoxide reductase (EC:1.8.4.-); K12267 peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
UPI0003D66CE7 related cluster n=1 Tax=unknown RepID=UPI0003D66CE7
66_010_scaffold_12_7
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6753..7922)
DNA (1170bp) protein (390aa)
UPI0003D60AFB related cluster n=1 Tax=unknown RepID=UPI0003D60AFB
Acetyltransferase {ECO:0000313|EMBL:ETI88320.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
acetyltransferase
66_010_scaffold_12_8
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7919..8659)
DNA (741bp) protein (247aa)
UPI0003D5EFD9 related cluster n=1 Tax=unknown RepID=UPI0003D5EFD9
Uncharacterized protein {ECO:0000313|EMBL:ETI88321.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein; K01163 hypothetical protein
66_010_scaffold_12_9
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8980..9567
DNA (588bp) protein (196aa)
UPI0003D6646B related cluster n=1 Tax=unknown RepID=UPI0003D6646B
Uncharacterized protein {ECO:0000313|EMBL:ETI88322.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
putative exonuclease
66_010_scaffold_12_10
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9605..10138
DNA (534bp) protein (178aa)
methylated DNA-protein cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
UPI0003D5F92E related cluster n=1 Tax=unknown RepID=UPI0003D5F92E
Methylated-DNA-protein-cysteine S-methyltransferase {ECO:0000313|EMBL:ETI88323.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_010_scaffold_12_11
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10313..11233)
DNA (921bp) protein (307aa)
UPI0003D62349 related cluster n=1 Tax=unknown RepID=UPI0003D62349
Uncharacterized protein {ECO:0000313|EMBL:KGF12002.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
LysR family transcriptional regulator
66_010_scaffold_12_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11361..11735
DNA (375bp) protein (125aa)
UPI0003D69B9B related cluster n=1 Tax=unknown RepID=UPI0003D69B9B
Uncharacterized protein {ECO:0000313|EMBL:KGF12001.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
holin-like protein; K06518 holin-like protein
66_010_scaffold_12_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11732..12421
DNA (690bp) protein (230aa)
UPI0003D5E6ED related cluster n=1 Tax=unknown RepID=UPI0003D5E6ED
Uncharacterized protein {ECO:0000313|EMBL:KGF12000.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
66_010_scaffold_12_14
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12654..14057
DNA (1404bp) protein (468aa)
UPI0003D62614 related cluster n=1 Tax=unknown RepID=UPI0003D62614
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KGF11999.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
FAD dependent oxidoreductase; K07137
66_010_scaffold_12_15
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14050..15342
DNA (1293bp) protein (431aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2]
UPI0003D61749 related cluster n=1 Tax=unknown RepID=UPI0003D61749
66_010_scaffold_12_16
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15361..16647
DNA (1287bp) protein (429aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
adenylosuccinate synthetase; K01939 adenylosuccinate synthase [EC:6.3.4.4]
UPI0003D68B3C related cluster n=1 Tax=unknown RepID=UPI0003D68B3C
66_010_scaffold_12_17
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17156..18415
DNA (1260bp) protein (420aa)
UPI0003D63B78 related cluster n=1 Tax=unknown RepID=UPI0003D63B78
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:ETI86301.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
gltT; Proton/sodium-glutamate symport protein
66_010_scaffold_12_18
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18775..19119
DNA (345bp) protein (115aa)
UPI0003D61D0E related cluster n=1 Tax=unknown RepID=UPI0003D61D0E
Arsenical resistance operon repressor {ECO:0000313|EMBL:ETI86302.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
66_010_scaffold_12_19
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19328..20710
DNA (1383bp) protein (461aa)
UPI0003D678B5 related cluster n=1 Tax=unknown RepID=UPI0003D678B5
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KGF11994.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein; K03326 C4-dicarboxylate transporter, DcuC family
66_010_scaffold_12_20
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20923..21444)
DNA (522bp) protein (174aa)
UPI0003D5F5BB related cluster n=1 Tax=unknown RepID=UPI0003D5F5BB
Proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:KGF11993.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
proton-coupled thiamine transporter YuaJ
66_010_scaffold_12_21
unknown

Not on your lists

comp(21520..21651)
DNA (132bp) protein (44aa)

This feature has no annotations

66_010_scaffold_12_22
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21764..22897
DNA (1134bp) protein (378aa)
glycine/betaine/L-proline ABC transporter ATPase (EC:3.6.3.25); K05847 osmoprotectant transport system ATP-binding protein
UPI0003D63EC3 related cluster n=1 Tax=unknown RepID=UPI0003D63EC3
ABC transporter ATPase {ECO:0000313|EMBL:KGF11992.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
66_010_scaffold_12_23
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22894..24471
DNA (1578bp) protein (526aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8J0_CLOSW
ABC transporter permease {ECO:0000313|EMBL:KGF11991.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
glycine betaine ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein
66_010_scaffold_12_24
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24781..26364
DNA (1584bp) protein (528aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I166_CLOCE
ABC transporter permease {ECO:0000313|EMBL:KGF11989.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
glycine betaine ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein; K05846 osmoprotectant transport system permease protein
66_010_scaffold_12_25
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26475..27434)
DNA (960bp) protein (320aa)
UPI0003D62947 related cluster n=1 Tax=unknown RepID=UPI0003D62947
Uncharacterized protein {ECO:0000313|EMBL:ETI88731.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
hypothetical protein; K03442 small conductance mechanosensitive channel
66_010_scaffold_12_26
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27493..31155)
DNA (3663bp) protein (1221aa)
UPI0003D67E93 related cluster n=1 Tax=unknown RepID=UPI0003D67E93
Uncharacterized protein {ECO:0000313|EMBL:KGF11988.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
cobN; cobalt insertion protein CobN
66_010_scaffold_12_27
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(31181..31642)
DNA (462bp) protein (154aa)
UPI0003D5E2C6 related cluster n=1 Tax=unknown RepID=UPI0003D5E2C6
Uncharacterized protein {ECO:0000313|EMBL:ETI86727.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_010_scaffold_12_28
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31791..32234
DNA (444bp) protein (148aa)
UPI0003D68976 related cluster n=1 Tax=unknown RepID=UPI0003D68976
Somatostatin {ECO:0000313|EMBL:ETI86726.1}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
66_010_scaffold_12_29
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32231..33535
DNA (1305bp) protein (435aa)
UPI0003D60D60 related cluster n=1 Tax=unknown RepID=UPI0003D60D60
Uncharacterized protein {ECO:0000313|EMBL:KGF11985.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
nodulation efficiency protein D; K07403 membrane-bound serine protease (ClpP class)
66_010_scaffold_12_30
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33545..34513
DNA (969bp) protein (323aa)
UPI0003D68CE5 related cluster n=1 Tax=unknown RepID=UPI0003D68CE5
UPF0365 protein HMPREF1633_03425 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11.;"
hypothetical protein
Displaying items 1-30 of 140 in total

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