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66_010_scaffold_70

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_70_trna_1
unknown

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comp(21..92)
DNA (72bp)
transferRNA Gln
66_010_scaffold_70_1
unknown

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238..804
DNA (567bp) protein (189aa)

This feature has no annotations

66_010_scaffold_70_2
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1010..2350
DNA (1341bp) protein (447aa)
Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W6G7_9FIRM
Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein {ECO:0000313|EMBL:EFF63434.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
sodium:dicarboxylate symporter family protein
66_010_scaffold_70_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2436..2864)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6T0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY29801.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
66_010_scaffold_70_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2927..4108)
DNA (1182bp) protein (394aa)
Transporter, monovalent cation:proton antiporter-2 (CPA2) family n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RHH2_CLOPF
Sodium/hydrogen exchanger family protein {ECO:0000313|EMBL:AIY84814.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
monovalent cation:proton antiporter-2 (CPA2) family protein
66_010_scaffold_70_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4219..5151)
DNA (933bp) protein (311aa)
Periplasmic binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAU4_9CLOT
Periplasmic binding protein {ECO:0000313|EMBL:EKY25094.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ferric siderophore ABC transporter,substrate-binding protein; K02016 iron complex transport system substrate-binding protein
66_010_scaffold_70_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5171..5926)
DNA (756bp) protein (252aa)
iron ABC transporter ATP-binding protein; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Putative ferrichrome ABC transporter, ATP-binding protein FhuC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAV0_9CLOT
Putative ferrichrome ABC transporter, ATP-binding protein FhuC {ECO:0000313|EMBL:EKY25093.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
66_010_scaffold_70_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5920..6873)
DNA (954bp) protein (318aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBV3_9CLOT
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EKY25092.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
iron chelate uptake ABC transporter permease; K02015 iron complex transport system permease protein
66_010_scaffold_70_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6863..7816)
DNA (954bp) protein (318aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAW7_9CLOT
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EKY25091.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
iron chelate uptake ABC transporter permease; K02015 iron complex transport system permease protein
66_010_scaffold_70_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7986..8681
DNA (696bp) protein (232aa)
AraC-family transcriptional regulator n=3 Tax=Clostridium botulinum RepID=A5I0N6_CLOBH
AraC family transcriptional regulator
AraC-family transcriptional regulator {ECO:0000313|EMBL:CAL82597.1}; TaxID=441771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A).;"
66_010_scaffold_70_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8756..9697)
DNA (942bp) protein (314aa)
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B6I0_RUMGN
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDN76513.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
xylR; xylose operon regulator
66_010_scaffold_70_11
Bacillus sp. SJS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9899..11764
DNA (1866bp) protein (622aa)
Conserved membrane-spanning protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CPY0_9BACI
Membrane protein {ECO:0000313|EMBL:KEZ55795.1}; TaxID=1423321 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SJS.;"
hypothetical protein
66_010_scaffold_70_12
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11823..15617)
DNA (3795bp) protein (1265aa)
pullulanase; K01200 pullulanase [EC:3.2.1.41]
Pullulanase family protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FWY9_9CLOT
Pullulanase family protein {ECO:0000313|EMBL:CDB16615.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
66_010_scaffold_70_13
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15852..17324)
DNA (1473bp) protein (491aa)
6-phospho-beta-glucosidase; K01223 6-phospho-beta-glucosidase [EC:3.2.1.86]
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AY44_9FIRM
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KHS57300.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
66_010_scaffold_70_14
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17337..19166)
DNA (1830bp) protein (610aa)
bglP2; PTS system beta-glucoside-specific EIIBCA component BglP (EC:2.7.1.69 2.7.1.-)
Putative ATP synthase F0, A subunit n=2 Tax=Clostridiales RepID=A7AZX0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:KHS57299.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
66_010_scaffold_70_15
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19337..20182)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9W9N2_9CLOT
Transcription antiterminator LicT {ECO:0000313|EMBL:KHS57298.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
bglG1; transcription antiterminator; K03488 beta-glucoside operon transcriptional antiterminator
66_010_scaffold_70_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20521..21879)
DNA (1359bp) protein (453aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA; K00599 [EC:2.1.1.-]
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Clostridium botulinum E RepID=B2V0B8_CLOBA
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:AIY82541.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
66_010_scaffold_70_17
unknown

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comp(21889..22185)
DNA (297bp) protein (99aa)

This feature has no annotations

66_010_scaffold_70_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22243..22962)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLH7_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41664.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
66_010_scaffold_70_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23045..23644)
DNA (600bp) protein (200aa)
DNA-binding protein, ComEA family n=2 Tax=Clostridium botulinum B RepID=B2TKI9_CLOBB
Competence ComEA helix-hairpin-helix repeat region domain protein {ECO:0000313|EMBL:AIY81638.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
DNA-binding protein, ComEA family; K02237 competence protein ComEA
66_010_scaffold_70_20
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23793..25127
DNA (1335bp) protein (445aa)
D-alanyl-D-alanine carboxypeptidase; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WEL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71662.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
66_010_scaffold_70_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25107..26009)
DNA (903bp) protein (301aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
yjbO; RNA pseudouridine synthase YjbO (EC:5.4.99.-)
Pseudouridine synthase, RluA family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q2M4_9CLOT
66_010_scaffold_70_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26011..27420)
DNA (1410bp) protein (470aa)
Membrane-bound protein LytR n=2 Tax=Clostridium botulinum B RepID=B2TKI5_CLOBB
membrane-bound protein LytR
Membrane-bound protein LytR {ECO:0000313|EMBL:ACD24945.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
66_010_scaffold_70_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27433..28002)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K319_CLOBU
Phosphohydrolase {ECO:0000313|EMBL:KJU73234.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
putative HD superfamily hydrolase of NAD metabolism
66_010_scaffold_70_24

Not on your lists

comp(28004..28606)
DNA (603bp) protein (201aa)
nadD; nicotinic acid mononucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGC0_CLOBU
Putative nicotinate-nucleotide adenylyltransferase {ECO:0000313|EMBL:ETJ16738.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
66_010_scaffold_70_25
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28608..28913)
DNA (306bp) protein (102aa)
Putative CRS1/YhbY domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EN08_9CLOT
Putative CRS1/YhbY domain protein {ECO:0000313|EMBL:CDG02577.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
putative RNA-binding protein, YhbY family
66_010_scaffold_70_26
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28930..30216)
DNA (1287bp) protein (429aa)
GTPase Obg n=1 Tax=Clostridium colicanis 209318 RepID=N9WE18_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
cgtA; Obg family GTPase CgtA
66_010_scaffold_70_27
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30388..30687)
DNA (300bp) protein (100aa)
50S ribosomal protein L27 n=2 Tax=Clostridium RepID=RL27_CLOB8
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
50S ribosomal protein L27 {ECO:0000255|HAMAP-Rule:MF_00539}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
66_010_scaffold_70_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30691..31062)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V0A6_CLOBA
hypothetical protein; K07584 hypothetical protein
Ribosomal protein {ECO:0000313|EMBL:KIL08822.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
66_010_scaffold_70_29
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(31068..31376)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Clostridium colicanis 209318 RepID=N9XZF6_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
Displaying items 1-30 of 37 in total

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