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66_010_scaffold_105

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_105_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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255..2750
DNA (2496bp) protein (832aa)
cation-transporting ATPase PacL (EC:3.6.3.-); K01537 Ca2+-transporting ATPase [EC:3.6.3.8]
Cadmium-transporting ATPase {ECO:0000313|EMBL:CDH90422.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CDH90422.1};; Cation-transporting ATPase PacL {ECO:0000313|EMBL:ACD23526.1}; EC=3.6.3.- {ECO:0000313|EMBL:ACD23526.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
HAD family hydrolase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287DF19
66_010_scaffold_105_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3030..3920
DNA (891bp) protein (297aa)
ABC transporter n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G6Q9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJU72855.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
ABC transporter; K09687 antibiotic transport system ATP-binding protein
66_010_scaffold_105_3
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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3910..4710
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C613_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS73582.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
hypothetical protein; K01992 ABC-2 type transport system permease protein
66_010_scaffold_105_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4827..4970
DNA (144bp) protein (48aa)
Helix-turn-helix family protein n=1 Tax=Clostridium difficile Y231 RepID=T4E8L4_CLODI
Predicted transcriptional regulator {ECO:0000313|EMBL:CCZ67451.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
putative transcriptional regulator
66_010_scaffold_105_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5123..6448
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03044.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
66_010_scaffold_105_6
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6461..7111
DNA (651bp) protein (217aa)
ABC transporter n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ7_9FIRM
ABC transporter {ECO:0000313|EMBL:EFW03043.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
putative ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein
66_010_scaffold_105_7
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7135..8511
DNA (1377bp) protein (459aa)
Transmembrane protein Vexp3 n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ6_9FIRM
Transmembrane protein Vexp3 {ECO:0000313|EMBL:EFW03042.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
transmembrane protein Vexp3; K02004 putative ABC transport system permease protein
66_010_scaffold_105_8
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8558..9214
DNA (657bp) protein (219aa)
DNA-binding response regulator VncR n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ5_9FIRM
DNA-binding response regulator VncR {ECO:0000313|EMBL:EFW03041.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
vncR; response regulator
66_010_scaffold_105_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9211..10539
DNA (1329bp) protein (443aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Sensor protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ4_9FIRM
vncS; sensor histidine kinase VncS
66_010_scaffold_105_10
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11154..12320
DNA (1167bp) protein (389aa)
Cro/CI family Transcriptional regulator n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GFZ3_9FIRM
Cro/CI family Transcriptional regulator {ECO:0000313|EMBL:EFW03039.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
66_010_scaffold_105_11
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12974..13201
DNA (228bp) protein (76aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=B6FVJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFP61140.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
66_010_scaffold_105_12
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13313..14926
DNA (1614bp) protein (538aa)
Conjugative transposon site-specific recombinase n=3 Tax=Firmicutes RepID=E7GFZ1_9FIRM
Conjugative transposon site-specific recombinase {ECO:0000313|EMBL:EFW03037.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
conjugative transposon site-specific recombinase
66_010_scaffold_105_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14985..15920
DNA (936bp) protein (312aa)
DNA-binding helix-turn-helix protein n=3 Tax=Lachnospiraceae RepID=A7B1X5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19403.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
XRE family transcriptional regulator
66_010_scaffold_105_14
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16138..16326)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PC77_9CLOT
Uridine kinase family protein {ECO:0000313|EMBL:CDM69932.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
uridine kinase
66_010_scaffold_105_15
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16347..16583)
DNA (237bp) protein (79aa)
uridine kinase (EC:2.7.1.48)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00037FBB0C
Uridine kinase family protein {ECO:0000313|EMBL:CDM69932.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
66_010_scaffold_105_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16659..17402)
DNA (744bp) protein (248aa)
PHP domain protein n=1 Tax=Clostridium difficile CD160 RepID=T3DLI5_CLODI
PHP domain protein {ECO:0000313|EMBL:EQF27465.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hydrolase; K04477 putative hydrolase
66_010_scaffold_105_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17565..20132
DNA (2568bp) protein (856aa)
Sigma-54 interaction domain protein n=9 Tax=Clostridium difficile RepID=D5Q9J1_CLODI
Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CCK99329.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
transcription antiterminator
66_010_scaffold_105_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20314..20766
DNA (453bp) protein (151aa)
PTS system transporter subunit IIA; K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69]
PTS system fructose IIA component family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DL94_CLODI
PTS system fructose IIA component family protein {ECO:0000313|EMBL:EQF27542.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
66_010_scaffold_105_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20790..21287
DNA (498bp) protein (166aa)
PTS system, mannose/fructose/sorbose IIB component {ECO:0000313|EMBL:CCK99331.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCK99331.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
PTS system sorbose subfamily IIB component n=6 Tax=Clostridium difficile RepID=D5Q9J3_CLODI
PTS system transporter subunit IIB
66_010_scaffold_105_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21290..21691
DNA (402bp) protein (134aa)
PTS system fructose IIA component family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DHQ4_CLODI
PTS system fructose IIA component family protein {ECO:0000313|EMBL:EQF27464.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
PTS system, IIa component
66_010_scaffold_105_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21709..22197
DNA (489bp) protein (163aa)
PTS system transporter subunit IIB; K02794 PTS system, mannose-specific IIB component [EC:2.7.1.69]
PTS system, mannose/fructose/sorbose IIB component {ECO:0000313|EMBL:CCL22383.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCL22383.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
PTS system sorbose subIIB component family protein n=200 Tax=Clostridium difficile RepID=C9XJ62_CLODC
66_010_scaffold_105_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22224..22979
DNA (756bp) protein (252aa)
PTS system sorbose-specific iic component family protein n=213 Tax=Clostridium difficile RepID=C9XJ63_CLODC
PTS system transporter subunit IIC; K02795 PTS system, mannose-specific IIC component
PTS system, mannose/fructose/sorbose IIC component {ECO:0000313|EMBL:CCL30031.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
66_010_scaffold_105_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22979..23842
DNA (864bp) protein (288aa)
PTS system, IId component n=9 Tax=Clostridium difficile RepID=C9XJ64_CLODC
PTS system transporter subunit IID; K02796 PTS system, mannose-specific IID component
PTS system, mannose/fructose/sorbose IID component {ECO:0000313|EMBL:CCL30032.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
66_010_scaffold_105_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23889..24368
DNA (480bp) protein (160aa)
L-2-amino-thiazoline-4-carboxylic acid hydrolase family protein n=1 Tax=Clostridium difficile CD69 RepID=T3ACI3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ34606.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
66_010_scaffold_105_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24432..25739
DNA (1308bp) protein (436aa)
Dipeptidase family protein {ECO:0000313|EMBL:EQE70257.1}; EC=3.4.13.- {ECO:0000313|EMBL:EQE70257.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Putative peptidase, M20A family n=1 Tax=Clostridium difficile CD002 RepID=U3VUZ1_CLODI
peptidase
66_010_scaffold_105_26
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25756..27021
DNA (1266bp) protein (422aa)
UPF0597 protein CPR_0790 n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Y790_CLOPS
UPF0597 protein U729_586 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
hypothetical protein
66_010_scaffold_105_27
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27034..27414
DNA (381bp) protein (127aa)
Putative endoribonuclease L-PSP n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q5Q0_9CLOT
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EKY23226.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
endoribonuclease L-PSP
66_010_scaffold_105_28
unknown

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28210..29274
DNA (1065bp) protein (355aa)

This feature has no annotations

66_010_scaffold_105_29
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29311..30594)
DNA (1284bp) protein (428aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DCD4_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERI94003.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
helix-turn-helix domain-containing protein
66_010_scaffold_105_30
unknown

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30795..30914
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 30 items

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