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66_010_scaffold_130

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_130_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..184)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZA99_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73960.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
66_010_scaffold_130_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(186..1127)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZA98_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73959.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
66_010_scaffold_130_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1117..3219)
DNA (2103bp) protein (701aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZA97_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73958.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
66_010_scaffold_130_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3221..6013)
DNA (2793bp) protein (931aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4ZA96_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73957.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
66_010_scaffold_130_5
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6192..6500)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M5V9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ00377.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
66_010_scaffold_130_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6521..7687)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FU01_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD67183.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
66_010_scaffold_130_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7820..8929)
DNA (1110bp) protein (370aa)
BRCT domain protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FVK4_9CLOT
BRCT domain protein {ECO:0000313|EMBL:CDB16110.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
hypothetical protein
66_010_scaffold_130_8
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8931..9350)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6G3Q4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB16109.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
66_010_scaffold_130_9
Enterococcus dispar, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(9543..10520)
DNA (978bp) protein (326aa)
Tagatose 1,6-diphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_00734};; D-tagatose-1,6-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00734}; TaxID=1139219 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus dispar ATCC 51266.;"
tagatose 1,6-diphosphate aldolase (EC:4.1.2.40); K01635 tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
Tagatose 1,6-diphosphate aldolase 2 n=1 Tax=Enterococcus dispar ATCC 51266 RepID=S0KNQ2_9ENTE
66_010_scaffold_130_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10573..11088)
DNA (516bp) protein (172aa)
lacB; galactose-6-phosphate isomerase subunit LacB; K01819 galactose-6-phosphate isomerase [EC:5.3.1.26]
Galactose-6-phosphate isomerase subunit LacB {ECO:0000255|HAMAP-Rule:MF_01556}; EC=5.3.1.26 {ECO:0000255|HAMAP-Rule:MF_01556};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Galactose-6-phosphate isomerase subunit LacB n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=LACB_CLOPE
66_010_scaffold_130_11
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11110..11538)
DNA (429bp) protein (143aa)
Galactose-6-phosphate isomerase subunit LacA {ECO:0000256|HAMAP-Rule:MF_01555}; EC=5.3.1.26 {ECO:0000256|HAMAP-Rule:MF_01555};; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus pallens ATCC BAA-351.;"
lacA; galactose-6-phosphate isomerase subunit LacA; K01819 galactose-6-phosphate isomerase [EC:5.3.1.26]
Galactose-6-phosphate isomerase subunit lacA n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2QQW3_9ENTE
66_010_scaffold_130_12
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11553..13799)
DNA (2247bp) protein (749aa)
Glycosyl hydrolase family 98 family protein n=1 Tax=Streptococcus mitis SK597 RepID=E1LUY5_STRMT
Glycosyl hydrolase family 98 family protein {ECO:0000313|EMBL:EFN99714.1}; TaxID=585204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis SK597.;"
putative exported glycosyl hydrolase
66_010_scaffold_130_13
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13837..16143)
DNA (2307bp) protein (769aa)
Uncharacterized protein n=15 Tax=Streptococcus pneumoniae RepID=J1RIZ5_STREE
Large secreted protein {ECO:0000313|EMBL:CRF95758.1}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
putative alpha-L-fucosidase
66_010_scaffold_130_14
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16193..17002)
DNA (810bp) protein (270aa)
Mannose-specific phosphotransferase system (PTS), IID component n=1 Tax=Streptococcus suis D9 RepID=G7S7K5_STRSU
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:KEQ43813.1}; TaxID=28037 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis.;"
manN; mannose-specific phosphotransferase system (PTS), IID component; K02796 PTS system, mannose-specific IID component
66_010_scaffold_130_15
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16999..17784)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WHY8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX71563.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
PTS sorbose-specific transporter subunit IIC; K02795 PTS system, mannose-specific IIC component
66_010_scaffold_130_16
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17820..18290)
DNA (471bp) protein (157aa)
PTS system sorbose subfamily transporter subunit IIB; K02794 PTS system, mannose-specific IIB component [EC:2.7.1.69]
PTS system mannose-specific EIIAB component {ECO:0000313|EMBL:EFN99717.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFN99717.1};; TaxID=585204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis SK597.;"
PTS system sorbose subfamily IIB component n=2 Tax=Streptococcus suis RepID=G7S7K7_STRSU
66_010_scaffold_130_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18281..18718)
DNA (438bp) protein (146aa)
hypothetical protein; K02793 PTS system, mannose-specific IIA component [EC:2.7.1.69]
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNL3_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:BAB80026.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_130_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18727..19380)
DNA (654bp) protein (218aa)
fucA; L-fuculose phosphate aldolase; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17]
L-fuculose-phosphate aldolase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNL4_CLOPE
L-fuculose-phosphate aldolase {ECO:0000313|EMBL:BAB80025.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_130_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19416..21203)
DNA (1788bp) protein (596aa)
fucI; L-fucose isomerase; K01818 L-fucose isomerase [EC:5.3.1.25]
L-fucose isomerase {ECO:0000255|HAMAP-Rule:MF_01254}; EC=5.3.1.25 {ECO:0000255|HAMAP-Rule:MF_01254};; 6-deoxy-L-galactose isomerase {ECO:0000255|HAMAP-Rule:MF_01254}; FucIase; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L-fucose isomerase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=FUCI_CLOPE
66_010_scaffold_130_20
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21228..21653)
DNA (426bp) protein (142aa)
ribose ABC transporter membrane protein; K02431 L-fucose mutarotase [EC:5.1.3.-]
High affinity ribose transport protein rbsD n=1 Tax=Streptococcus mitis SK597 RepID=E1LUY9_STRMT
High affinity ribose transport protein rbsD {ECO:0000313|EMBL:EFN99718.1}; TaxID=585204 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis SK597.;"
66_010_scaffold_130_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21667..23070)
DNA (1404bp) protein (468aa)
fucK; rhamnulokinase; K00879 L-fuculokinase [EC:2.7.1.51]
Rhamnulokinase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNL6_CLOPE
Rhamnulokinase {ECO:0000313|EMBL:BAB80023.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_130_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23254..24036
DNA (783bp) protein (261aa)
Probable transcriptional regulator n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNL7_CLOPE
transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:BAB80022.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_130_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24108..24290)
DNA (183bp) protein (61aa)
Riboflavin biosynthesis protein RibD C-domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J3X8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88729.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RibD domain-containing protein
66_010_scaffold_130_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24567..25157
DNA (591bp) protein (197aa)
Sigma-70 region 2 domain protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UWH0_CLOBA
RNA polymerase sigma 70 {ECO:0000313|EMBL:KIL07513.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
sigma-70 region 2 domain-containing protein
66_010_scaffold_130_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(25263..25664)
DNA (402bp) protein (134aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RS02_9FIRM
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:CDC48099.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
66_010_scaffold_130_26
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

25769..26137
DNA (369bp) protein (123aa)
Transcriptional regulator HxlR family n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RYH8_9FIRM
Transcriptional regulator HxlR family {ECO:0000313|EMBL:CDC48096.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
transcriptional regulator, MarR family
Displaying 26 items

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