ggKbase home page

66_010_scaffold_205

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_205_1
unknown

Not on your lists

comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

66_010_scaffold_205_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75..488)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y363_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU70767.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
66_010_scaffold_205_3
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

718..951
DNA (234bp) protein (78aa)
Hydrogenase assembly chaperone HypC/HupF n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CL89_9FIRM
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:ERI91274.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hydrogenase assembly chaperone hypC/hupF; K04653 hydrogenase expression/formation protein HypC
66_010_scaffold_205_4
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

948..2018
DNA (1071bp) protein (357aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D3D8_9FIRM
Hydrogenase isoenzymes formation protein HypD {ECO:0000313|EMBL:KAJ53358.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
hypD; hypD hydrogenase expression/formation protein HypD
66_010_scaffold_205_5
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2033..3034
DNA (1002bp) protein (334aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EEV9_9FIRM
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:ERI91276.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE
66_010_scaffold_205_6
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3051..3431
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Caloramator australicus RC3 RepID=I7K718_9CLOT
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:KAJ53360.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
66_010_scaffold_205_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3446..4528
DNA (1083bp) protein (361aa)
Respiratory-chain NADH dehydrogenase, subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QP99_9CLOT
Respiratory-chain NADH dehydrogenase, subunit {ECO:0000313|EMBL:EKY29392.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NiFe-hydrogenase III large subunit
66_010_scaffold_205_8
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4529..4870
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN42_9CLOT
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
hydrogenase nickel insertion protein HypA
66_010_scaffold_205_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4872..5522
DNA (651bp) protein (217aa)
Hydrogenase accessory protein HypB n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN19_9CLOT
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EKY29394.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hydrogenase accessory protein HypB
66_010_scaffold_205_10
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5534..6064
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KL63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74235.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein; K05569 multicomponent Na+:H+ antiporter subunit E
66_010_scaffold_205_11
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6064..6327
DNA (264bp) protein (88aa)
Putative Na(+)/H(+) antiporter subunit F n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNA5_9CLOT
Monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:KAJ53365.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
multiple resistance and pH regulation protein F; K05570 multicomponent Na+:H+ antiporter subunit F
66_010_scaffold_205_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6324..6671
DNA (348bp) protein (116aa)
Monovalent cation/proton antiporter, MnhG/PhaG subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QPA3_9CLOT
Monovalent cation/proton antiporter, MnhG/PhaG subunit {ECO:0000313|EMBL:EKY29397.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Na(+)/H(+) antiporter subunit G; K05571 multicomponent Na+:H+ antiporter subunit G
66_010_scaffold_205_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6664..6930
DNA (267bp) protein (89aa)
Monovalent cation/H+ antiporter subunit B domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN47_9CLOT
Monovalent cation/H+ antiporter subunit B domain protein {ECO:0000313|EMBL:EKY29398.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
membrane bound hydrogenase subunit MbhD
66_010_scaffold_205_14
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6927..7217
DNA (291bp) protein (97aa)
Monovalent cation/H+ antiporter subunit B domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN23_9CLOT
Na+/H+ antiporter MnhB subunit-related protein {ECO:0000313|EMBL:KAJ53368.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
membrane bound hydrogenase subunit MbhE
66_010_scaffold_205_15
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7204..7671
DNA (468bp) protein (156aa)
Membrane bound hydrogenase MbhF subunit n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU31_9CLOT
Na+/H+ antiporter MnhB subunit-related protein {ECO:0000313|EMBL:KAJ53368.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
monovalent cation/H+ antiporter subunit B; K05566 multicomponent Na+:H+ antiporter subunit B
66_010_scaffold_205_16
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7661..8005
DNA (345bp) protein (115aa)
Putative Na(+)/H(+) antiporter subunit C n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QNA9_9CLOT
Monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:KAJ53369.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
putative monovalent cation/H+ antiporter subunit C; K05567 multicomponent Na+:H+ antiporter subunit C
66_010_scaffold_205_17
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8002..9945
DNA (1944bp) protein (648aa)
Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 n=1 Tax=Clostridium sp. CAG:265 RepID=R6LJ86_9CLOT
Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 {ECO:0000313|EMBL:CDB74242.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
66_010_scaffold_205_18
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9959..10939
DNA (981bp) protein (327aa)
NADH dehydrogenase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN52_9CLOT
Respiratory-chain NADH dehydrogenase subunit 1 {ECO:0000313|EMBL:KAJ53371.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
cooK; carbon monoxide-induced hydrogenase subunit CooK
66_010_scaffold_205_19
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10954..11391
DNA (438bp) protein (146aa)
hydrogenase-4 subunit I (EC:1.-.-.-)
NADH ubiquinone oxidoreductase, subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QN29_9CLOT
Hydrogenase-4 subunit I {ECO:0000313|EMBL:KAJ53372.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
66_010_scaffold_205_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11391..11849
DNA (459bp) protein (153aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU36_9CLOT
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDB15575.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
NADH-plastoquinone oxidoreductase subunit
66_010_scaffold_205_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12199..12717
DNA (519bp) protein (173aa)
GnaT-family acetyltransferase n=2 Tax=Clostridium botulinum B RepID=B2TKR8_CLOBB
GnaT-family acetyltransferase
GnaT-family acetyltransferase {ECO:0000313|EMBL:ACD22038.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
66_010_scaffold_205_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12714..12878)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSC3_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42546.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
66_010_scaffold_205_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13075..14025
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V260_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL09075.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
66_010_scaffold_205_24
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14035..15081
DNA (1047bp) protein (349aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
DNA polymerase IV n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MWG0_CLOSA
66_010_scaffold_205_25
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15439..16605
DNA (1167bp) protein (389aa)
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20]
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
Tryptophan synthase beta chain n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJJ0_CELLD
66_010_scaffold_205_26
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16738..19038
DNA (2301bp) protein (767aa)
Putative ATP-dependent protease n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q445_9CLOT
Putative ATP-dependent protease {ECO:0000313|EMBL:EKY22774.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ATP-dependent protease
Displaying 26 items

View Taxonomy