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66_010_scaffold_87

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Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_87_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37..726)
DNA (690bp) protein (230aa)
Radical SAM domain protein n=4 Tax=Clostridium perfringens RepID=B1BIL5_CLOPF
Radical SAM domain protein {ECO:0000313|EMBL:EDT16342.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
radical SAM domain-containing protein
66_010_scaffold_87_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(744..1301)
DNA (558bp) protein (186aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CY28_CLOPF
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT25304.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_010_scaffold_87_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1320..2300)
DNA (981bp) protein (327aa)
Nucleoside hydrolase, IUNH family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V099_CLOPF
Nucleoside hydrolase, IUNH family {ECO:0000313|EMBL:EDT72831.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
nucleoside hydrolase, IUNH family
66_010_scaffold_87_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2811..3599)
DNA (789bp) protein (263aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Clostridium perfringens RepID=GTPC1_CLOPE
hypothetical protein
66_010_scaffold_87_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3599..4288)
DNA (690bp) protein (230aa)
hypothetical protein; K06967 tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPM4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16234.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_87_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4302..5189)
DNA (888bp) protein (296aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SRH4_CLOPS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABG85849.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_87_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5425..6546)
DNA (1122bp) protein (374aa)
RNA polymerase sigma factor SigA n=10 Tax=Clostridium perfringens RepID=H7CY33_CLOPF
sigA; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_87_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6552..8339)
DNA (1788bp) protein (596aa)
dnaG; DNA primase; K02316 DNA primase [EC:2.7.7.-]
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
DNA primase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIV5_CLOPE
66_010_scaffold_87_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8508..9536)
DNA (1029bp) protein (343aa)
dgtP; deoxyguanosinetriphosphate triphosphohydrolase-like protein; K01129 dGTPase [EC:3.1.5.1]
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CSZ1_CLOPF
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_010_scaffold_87_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9738..10817
DNA (1080bp) protein (360aa)
Putative spore coat protein n=4 Tax=Clostridium perfringens RepID=H7CY36_CLOPF
spore coat protein
Putative spore coat protein {ECO:0000313|EMBL:EIA16413.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_87_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10869..13499)
DNA (2631bp) protein (877aa)
ppdK; pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1]
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EDT16283.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EDT16283.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Pyruvate phosphate dikinase n=8 Tax=Clostridium perfringens RepID=H7CY37_CLOPF
66_010_scaffold_87_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13600..14232)
DNA (633bp) protein (211aa)
CBS domain-containing protein n=10 Tax=Clostridium perfringens RepID=H7CY38_CLOPF
hypothetical protein
CBS domain protein {ECO:0000313|EMBL:EDS80142.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_010_scaffold_87_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14437..15063)
DNA (627bp) protein (209aa)
UBA/TS-N domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CY39_CLOPF
UBA/TS-N domain-containing protein
UBA/TS-N domain protein {ECO:0000313|EMBL:EDT16248.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_87_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15051..15722)
DNA (672bp) protein (224aa)
DNA repair protein RecO n=2 Tax=Clostridium perfringens RepID=RECO_CLOPE
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O)
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_87_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15822..16712)
DNA (891bp) protein (297aa)
GTPase Era n=8 Tax=Clostridium perfringens RepID=ERA_CLOPS
era; GTP-binding protein Era; K03595 GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_87_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16721..17119)
DNA (399bp) protein (133aa)
cdd; cytidine deaminase (EC:3.5.4.5); K01489 cytidine deaminase [EC:3.5.4.5]
Cytidine deaminase {ECO:0000313|EMBL:ABG86289.1}; EC=3.5.4.5 {ECO:0000313|EMBL:ABG86289.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Cytidine deaminase n=2 Tax=Clostridium perfringens RepID=Q0SRG0_CLOPS
66_010_scaffold_87_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17160..17861)
DNA (702bp) protein (234aa)
diacylglycerol kinase/PAP2 family protein; K00901 diacylglycerol kinase [EC:2.7.1.107]
Diacylglycerol kinase/PAP2 family protein n=8 Tax=Clostridium perfringens RepID=H7CY43_CLOPF
Diacylglycerol kinase/PAP2 family protein {ECO:0000313|EMBL:EDT72793.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_010_scaffold_87_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17889..18395)
DNA (507bp) protein (169aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Endoribonuclease YbeY n=5 Tax=Clostridium perfringens RepID=YBEY_CLOP1
metalloprotease; K07042 probable rRNA maturation factor
66_010_scaffold_87_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18397..20451)
DNA (2055bp) protein (685aa)
Putative hydrolase n=2 Tax=Clostridium perfringens RepID=H7CY45_CLOPF
hydrolase; K07037
Putative hydrolase {ECO:0000313|EMBL:EIA16422.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_87_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20488..21624)
DNA (1137bp) protein (379aa)
Stage IV sporulation protein n=3 Tax=Clostridium perfringens RepID=Q8XIU3_CLOPE
spoIV; stage IV sporulation protein; K06438 similar to stage IV sporulation protein
Putative stage IV sporulation protein {ECO:0000313|EMBL:EDT27771.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_010_scaffold_87_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21626..21907)
DNA (282bp) protein (94aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=Q8XIU2_CLOPE
sporulation protein YqfC
Uncharacterized protein {ECO:0000313|EMBL:BAB81727.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_87_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22132..22581)
DNA (450bp) protein (150aa)
GatB/Yqey domain-containing protein n=11 Tax=Clostridium perfringens RepID=H7CY48_CLOPF
GatB/Yqey domain-containing protein; K09117 hypothetical protein
GatB/Yqey domain protein {ECO:0000313|EMBL:EDS80268.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_010_scaffold_87_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22631..22807)
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=11 Tax=Clostridium perfringens RepID=RS21_CLOP1
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_010_scaffold_87_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22927..23271)
DNA (345bp) protein (115aa)
HIT family protein n=4 Tax=Clostridium perfringens RepID=Q0SRF2_CLOPS
HIT family protein; K02503 Hit-like protein involved in cell-cycle regulation
HIT family protein {ECO:0000313|EMBL:ABG86194.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_87_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23340..24644)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XIT8_CLOPE
MiaB-like tRNA modifying protein
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EDT25243.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_010_scaffold_87_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24644..25396)
DNA (753bp) protein (251aa)
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLG6_CLOPF
66_010_scaffold_87_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25419..26360)
DNA (942bp) protein (314aa)
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-); K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Ribosomal protein L11 methyltransferase n=2 Tax=Clostridium perfringens RepID=B1RLG7_CLOPF
66_010_scaffold_87_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26586..26942)
DNA (357bp) protein (119aa)
GntR family transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CY54_CLOPF
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:EIA16431.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_87_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26944..28122)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPK0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT16364.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
66_010_scaffold_87_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28138..28965)
DNA (828bp) protein (276aa)
Putative membrane protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLH0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16433.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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