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66_010_scaffold_120

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_120_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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99..734
DNA (636bp) protein (212aa)
Probable septum site-determining protein MinC n=11 Tax=Clostridium perfringens RepID=MINC_CLOP1
minC; septum formation inhibitor; K03610 septum site-determining protein MinC
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_120_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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763..1560
DNA (798bp) protein (266aa)
Site-determining protein n=11 Tax=Clostridium perfringens RepID=H7CYG2_CLOPF
minD; septum site-determining protein MinD; K03609 septum site-determining protein MinD
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_010_scaffold_120_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1571..1843
DNA (273bp) protein (91aa)
Cell division topological specificity factor n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=MINE_CLOPS
minE; cell division topological specificity factor MinE; K03608 cell division topological specificity factor
Cell division topological specificity factor {ECO:0000255|HAMAP-Rule:MF_00262}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_120_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1992..3116
DNA (1125bp) protein (375aa)
Cell cycle protein FtsW n=7 Tax=Clostridium perfringens RepID=H7CYG0_CLOPF
cell cycle protein FtsW; K05837 rod shape determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:EDT15553.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_120_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3268..4128
DNA (861bp) protein (287aa)
M23 peptidase domain protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLS5_CLOPF
M23 peptidase domain protein {ECO:0000313|EMBL:EDT15641.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
M23 peptidase domain-containing protein
66_010_scaffold_120_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4107..4961
DNA (855bp) protein (285aa)
M50 family peptidase (EC:3.4.24.-); K01417 [EC:3.4.24.-]
M50 family peptidase n=3 Tax=Clostridium perfringens RepID=H7CYF8_CLOPF
M50 family peptidase {ECO:0000313|EMBL:EIA16336.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_120_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5093..6946
DNA (1854bp) protein (618aa)
Radical SAM domain protein n=3 Tax=Clostridium perfringens RepID=Q0TNH9_CLOP1
Uncharacterized protein {ECO:0000313|EMBL:BAB81839.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
radical SAM domain-containing protein
66_010_scaffold_120_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6930..7631
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR49_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87684.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_120_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7648..9090
DNA (1443bp) protein (481aa)
ribonuclease; K08301 ribonuclease G [EC:3.1.26.-]
Ribonuclease, Rne/Rng family n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR50_CLOPS
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ABG86962.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_120_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9216..9527
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=10 Tax=Clostridium perfringens RepID=RL21_CLOP1
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_120_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9537..9908
DNA (372bp) protein (124aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q0SR52_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87268.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_120_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9912..10214
DNA (303bp) protein (101aa)
50S ribosomal protein L27 n=10 Tax=Clostridium perfringens RepID=RL27_CLOP1
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_120_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10381..11667
DNA (1287bp) protein (429aa)
GTPase Obg n=7 Tax=Clostridium perfringens RepID=OBG_CLOP1
obgE; GTPase ObgE; K03979 GTP-binding protein
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_120_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11685..11987
DNA (303bp) protein (101aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=Q8XIJ3_CLOPE
putative RNA-binding protein; K07574 RNA-binding protein
Putative RNA-binding protein {ECO:0000313|EMBL:EDT15284.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_120_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11989..12597
DNA (609bp) protein (203aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Probable nicotinate-nucleotide adenylyltransferase n=8 Tax=Clostridium perfringens RepID=NADD_CLOP1
66_010_scaffold_120_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12600..13169
DNA (570bp) protein (190aa)
HD domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR57_CLOPS
HD domain-containing protein
HD domain protein {ECO:0000313|EMBL:ABG87828.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_120_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13192..14514
DNA (1323bp) protein (441aa)
Cell envelope-related transcriptional attenuator domain protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR58_CLOPS
transcription regulator LytR-like protein
Cell envelope-related transcriptional attenuator domain protein {ECO:0000313|EMBL:ABG85905.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_120_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14502..15398
DNA (897bp) protein (299aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase, RluA family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLV3_CLOPF
66_010_scaffold_120_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15430..16764)
DNA (1335bp) protein (445aa)
dacF; D-alanyl-D-alanine carboxypeptidase; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIJ8_CLOPE
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:BAB81827.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_120_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16960..17724
DNA (765bp) protein (255aa)
Putative comE operon protein 1 n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLV5_CLOPF
Putative comE operon protein 1 {ECO:0000313|EMBL:EDS79185.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
comEA; competence protein ComE; K02237 competence protein ComEA
66_010_scaffold_120_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17769..18800
DNA (1032bp) protein (344aa)
selD; selenide, water dikinase (EC:2.7.9.3); K01008 selenide, water dikinase [EC:2.7.9.3]
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Selenide, water dikinase n=2 Tax=Clostridium perfringens RepID=Q0TNJ3_CLOP1
66_010_scaffold_120_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18817..20205
DNA (1389bp) protein (463aa)
selA; selenocysteine synthase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
L-seryl-tRNA(Sec) selenium transferase {ECO:0000255|HAMAP-Rule:MF_00423}; EC=2.9.1.1 {ECO:0000255|HAMAP-Rule:MF_00423};; Selenocysteine synthase {ECO:0000255|HAMAP-Rule:MF_00423}; Short=Sec synthase {ECO:0000255|HAMAP-Rule:MF_00423};; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000255|HAMAP-Rule:MF_00423}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=SELA_CLOPS
66_010_scaffold_120_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20206..22113
DNA (1908bp) protein (636aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Clostridium perfringens F262 RepID=H7CYE1_CLOPF
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EIA16319.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
selB; selenocysteine-specific translation elongation factor; K03833 selenocysteine-specific elongation factor
66_010_scaffold_120_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22300..22749
DNA (450bp) protein (150aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XIK4_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81821.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_120_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22777..24132
DNA (1356bp) protein (452aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-); K00599 [EC:2.1.1.-]
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ABG85920.1}; EC=2.1.1.- {ECO:0000313|EMBL:ABG85920.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR66_CLOPS
66_010_scaffold_120_26
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24579..25745
DNA (1167bp) protein (389aa)
Iron-containing alcohol dehydrogenase family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VIE9_CLOBI
Iron-containing alcohol dehydrogenase family protein {ECO:0000313|EMBL:EQK41263.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
alcohol dehydrogenase, class IV
66_010_scaffold_120_27
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25842..27086
DNA (1245bp) protein (415aa)
oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000381AD69
Dihydropyrimidine dehydrogenase {ECO:0000313|EMBL:KHS56682.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
66_010_scaffold_120_28
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27133..27477)
DNA (345bp) protein (115aa)
HTH-type transcriptional activator hxlR n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VKF5_CLOBI
HTH-type transcriptional activator hxlR {ECO:0000313|EMBL:EQK41261.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 638.;"
HxlR family transcriptional regulator
Displaying 28 items

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