ggKbase home page

66_010_scaffold_142

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_142_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(165..1088)
DNA (924bp) protein (308aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
glutaminase; K01425 glutaminase [EC:3.5.1.2]
Glutaminase n=4 Tax=Clostridium perfringens RepID=H7CT30_CLOPF
66_010_scaffold_142_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1392..2705)
DNA (1314bp) protein (438aa)
Voltage-gated chloride channel family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RIL2_CLOPF
Voltage-gated chloride channel family protein {ECO:0000313|EMBL:EDT26203.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
voltage-gated chloride channel family protein
66_010_scaffold_142_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3082..3741)
DNA (660bp) protein (220aa)
Isochorismatase family protein n=3 Tax=Clostridium perfringens RepID=H7CT27_CLOPF
Isochorismatase family protein {ECO:0000313|EMBL:EIA18321.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
isochorismatase
66_010_scaffold_142_4
unknown

Not on your lists

comp(3717..3827)
DNA (111bp) protein (37aa)

This feature has no annotations

66_010_scaffold_142_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4037..5098
DNA (1062bp) protein (354aa)
Putative membrane protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH42_CLOPF
permease
Putative membrane protein {ECO:0000313|EMBL:EDS81056.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_010_scaffold_142_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5149..5601)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V653_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13920.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
66_010_scaffold_142_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5892..6638
DNA (747bp) protein (249aa)
DeoR family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CT24_CLOPF
DeoR family transcriptional regulator; K03436 DeoR family transcriptional regulator, fructose operon transcriptional repressor
DeoR family transcriptional regulator {ECO:0000313|EMBL:EIA18318.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_142_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6638..7558
DNA (921bp) protein (307aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
fruB; 1-phosphofructokinase; K00882 1-phosphofructokinase [EC:2.7.1.56]
Tagatose-6-phosphate kinase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V655_CLOPF
66_010_scaffold_142_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7562..9454
DNA (1893bp) protein (631aa)
PTS system, fructose-specific, IIABC component {ECO:0000313|EMBL:EDS80913.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDS80913.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
fruA; PTS system fructose-specific transporter subunit IIABC (EC:2.7.1.69); K02768 PTS system, fructose-specific IIA component [EC:2.7.1.69]; K02769 PTS system, fructose-specific IIB component [EC:2.7.1.69]; K02770 PTS system, fructose-specific IIC component
PTS system, fructose-specific, IIABC component n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BH38_CLOPF
66_010_scaffold_142_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9696..10694)
DNA (999bp) protein (333aa)
Phosphate transporter family protein n=9 Tax=Clostridium perfringens RepID=H7CT21_CLOPF
phosphate transporter family protein; K03306 inorganic phosphate transporter, PiT family
Phosphate transporter family protein {ECO:0000313|EMBL:EDT13909.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_142_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10687..11319)
DNA (633bp) protein (211aa)
Phosphate transport regulator n=10 Tax=Clostridium perfringens RepID=H7CT20_CLOPF
hypothetical protein; K07220 hypothetical protein
Phosphate transport regulator {ECO:0000313|EMBL:EIA18314.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_142_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11605..12192)
DNA (588bp) protein (196aa)
CDP-alcohol phosphatidyltransferase family protein n=8 Tax=Clostridium perfringens RepID=H7CT19_CLOPF
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase family protein {ECO:0000313|EMBL:EIA18313.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_142_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12355..13467)
DNA (1113bp) protein (371aa)
Iron-sulfur cluster-binding protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R7E6_CLOPF
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EDT23843.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
cysteine-rich domain-contain protein
66_010_scaffold_142_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13457..14152)
DNA (696bp) protein (232aa)
DedA family protein n=9 Tax=Clostridium perfringens RepID=H7CT17_CLOPF
DedA family protein
DedA family protein {ECO:0000313|EMBL:EDT13903.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_142_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14500..15381)
DNA (882bp) protein (294aa)
ABC transporter, permease protein n=8 Tax=Clostridium perfringens RepID=H7CT16_CLOPF
ABC transporter permease; K10202 N-acetylglucosamine transport system permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:EIA18310.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_142_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15383..16309)
DNA (927bp) protein (309aa)
ABC transporter permease n=6 Tax=Clostridium perfringens RepID=H7CT15_CLOPF
ABC transporter, permease protein {ECO:0000313|EMBL:EDT13923.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter permease; K10201 N-acetylglucosamine transport system permease protein
66_010_scaffold_142_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16388..17773)
DNA (1386bp) protein (462aa)
ABC transporter n=4 Tax=Clostridium perfringens RepID=H7CT14_CLOPF
ABC transporter; K10200 N-acetylglucosamine transport system substrate-binding protein
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS81063.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_010_scaffold_142_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17926..19515)
DNA (1590bp) protein (530aa)
DNA-binding response regulator, AraC family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V665_CLOPF
DNA-binding response regulator, AraC family {ECO:0000313|EMBL:EDT70697.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
AraC family transcriptional regulator
66_010_scaffold_142_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19528..21279)
DNA (1752bp) protein (584aa)
sensor histidine kinase; K07718 two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
Sensor histidine kinase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RNI5_CLOPF
Sensor histidine kinase {ECO:0000313|EMBL:EIA18306.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_142_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21464..23701)
DNA (2238bp) protein (746aa)
hypothetical protein; K15533 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase [EC:2.4.1.211]
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMW5_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:BAB80279.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_142_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23957..24220)
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XMW6_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80278.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Displaying 21 items

View Taxonomy