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66_010_scaffold_146

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_146_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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37..450
DNA (414bp) protein (138aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=B1BF38_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT13398.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_146_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

470..1420
DNA (951bp) protein (317aa)
SPFH domain-containing protein/band 7 family protein n=9 Tax=Clostridium perfringens RepID=H7CVC0_CLOPF
SPFH domain-containing protein/band 7 family protein
SPFH domain-containing protein/band 7 family protein {ECO:0000313|EMBL:EIA17238.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_146_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1600..2652
DNA (1053bp) protein (351aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1]
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Alanine racemase n=3 Tax=Clostridium perfringens RepID=H7CVC1_CLOPF
66_010_scaffold_146_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2883..3917
DNA (1035bp) protein (345aa)
Electron transport complex, RnfABCDGE type, G subunit n=1 Tax=Clostridium perfringens F262 RepID=H7CVC2_CLOPF
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
rnfG; RnfABCDGE type electron transport complex subunit G; K03612 electron transport complex protein RnfG
66_010_scaffold_146_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3935..4603
DNA (669bp) protein (223aa)
Electron transport complex, rnfabcdge type, E subunit n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQD3_CLOPF
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
rnfE; electron transport complex protein RsxE; K03613 electron transport complex protein RnfE
66_010_scaffold_146_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4634..5209
DNA (576bp) protein (192aa)
Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BY31_CLOPF
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
rnfA; RnfABCDGE type electron transport complex subunit A; K03617 electron transport complex protein RnfA
66_010_scaffold_146_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5226..6047
DNA (822bp) protein (274aa)
Electron transport complex, RnfABCDGE type, B subunit n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRG6_CLOPF
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:EDT71024.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
rnfB; ferredoxin; K03616 electron transport complex protein RnfB
66_010_scaffold_146_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6111..6611
DNA (501bp) protein (167aa)
cytidine/deoxycytidylate deaminase; K01493 dCMP deaminase [EC:3.5.4.12]
Cytidine/deoxycytidylate deaminase family protein n=2 Tax=Clostridium perfringens RepID=Q0TRH2_CLOP1
Cytidine/deoxycytidylate deaminase family protein {ECO:0000313|EMBL:EDT25509.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_010_scaffold_146_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6782..7246
DNA (465bp) protein (155aa)
MarR family transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CVC7_CLOPF
MarR family transcriptional regulator {ECO:0000313|EMBL:EIA17245.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
MarR family transcriptional regulator
66_010_scaffold_146_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7248..8222
DNA (975bp) protein (325aa)
fabH; 3-oxoacyl-ACP synthase; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQD8_CLOPF
66_010_scaffold_146_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8319..9263
DNA (945bp) protein (315aa)
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=Clostridium perfringens RepID=Q0TRG9_CLOP1
66_010_scaffold_146_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9267..10007
DNA (741bp) protein (247aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EDT71029.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EDT71029.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
fabG; 3-ketoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-(Acyl-carrier-protein) reductase n=2 Tax=Clostridium perfringens RepID=B1RRG1_CLOPF
66_010_scaffold_146_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10022..11263
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RRG0_CLOPF
66_010_scaffold_146_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11275..11766
DNA (492bp) protein (164aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=6 Tax=Clostridium perfringens RepID=H7CVD2_CLOPF
accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EIA17250.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_146_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11769..12188
DNA (420bp) protein (140aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000255|HAMAP-Rule:MF_00406}; Short=(3R)-hydroxymyristoyl-ACP dehydrase {ECO:0000255|HAMAP-Rule:MF_00406};; Beta-hydroxyacyl-ACP dehydratase {ECO:0000255|HAMAP-Rule:MF_00406}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (st
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=10 Tax=Clostridium perfringens RepID=FABZ_CLOP1
66_010_scaffold_146_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12200..13552
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EDT71013.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EDT71013.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
accC; biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Acetyl-CoA carboxylase, biotin carboxylase n=3 Tax=Clostridium perfringens RepID=B1RRF7_CLOPF
66_010_scaffold_146_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13545..14423
DNA (879bp) protein (293aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta (EC:6.4.1.2); K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=6 Tax=Clostridium perfringens RepID=ACCD_CLOP1
66_010_scaffold_146_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14416..15231
DNA (816bp) protein (272aa)
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str.
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=3 Tax=Clostridium perfringens RepID=ACCA_CLOP1
66_010_scaffold_146_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15330..15719)
DNA (390bp) protein (130aa)
PadR family transcriptional regulator n=7 Tax=Clostridium perfringens RepID=H7CVD7_CLOPF
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDT25508.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_010_scaffold_146_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16139..16957)
DNA (819bp) protein (273aa)
AP endonuclease; K01151 deoxyribonuclease IV [EC:3.1.21.2]
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQE9_CLOPF
AP endonuclease {ECO:0000313|EMBL:EIA17257.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_146_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17174..17884
DNA (711bp) protein (237aa)
rluB; ribosomal large subunit pseudouridine synthase B; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Pseudouridine synthase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0STT8_CLOPS
66_010_scaffold_146_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17890..18441
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1RC41_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT22201.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_010_scaffold_146_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18473..19348
DNA (876bp) protein (292aa)
RpiR family transcriptional regulator n=10 Tax=Clostridium perfringens RepID=H7CVE2_CLOPF
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDT22195.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_010_scaffold_146_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19565..20785
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RT59_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13853.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein; K07007
66_010_scaffold_146_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20907..21560
DNA (654bp) protein (218aa)
cmk; cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000255|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000255|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000255|HAMAP-Rule:MF_00238}; Short=CMP kinase {ECO:0000255|HAMAP-Rule:MF_00238};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Cytidylate kinase n=9 Tax=Clostridium perfringens RepID=KCY_CLOP1
66_010_scaffold_146_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21562..22410
DNA (849bp) protein (283aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=5 Tax=Clostridium perfringens RepID=ISPH_CLOP1
66_010_scaffold_146_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22520..23314
DNA (795bp) protein (265aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRF2_CLOP1
acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDT25788.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_010_scaffold_146_28
unknown

Not on your lists

23320..23451
DNA (132bp) protein (44aa)

This feature has no annotations

66_010_scaffold_146_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23414..23563)
DNA (150bp) protein (50aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CVE7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17265.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Displaying 29 items

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