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66_010_scaffold_178

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_178_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(58..1656)
DNA (1599bp) protein (533aa)
Putative membrane protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUC7_CLOP1
ABC transporter permease; K01992 ABC-2 type transport system permease protein
Putative membrane protein {ECO:0000313|EMBL:ABG86005.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_178_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1649..2374)
DNA (726bp) protein (242aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TUC8_CLOP1
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT72686.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_010_scaffold_178_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2612..3463)
DNA (852bp) protein (284aa)
DegV family protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SW75_CLOPS
degV family protein
DegV family protein {ECO:0000313|EMBL:ABG85495.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_178_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3729..5708)
DNA (1980bp) protein (660aa)
UvrABC system protein B n=2 Tax=Clostridium perfringens RepID=UVRB_CLOP1
UvrABC system protein B {ECO:0000255|HAMAP-Rule:MF_00204}; Short=Protein UvrB {ECO:0000255|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000255|HAMAP-Rule:MF_00204}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B
66_010_scaffold_178_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5796..7076)
DNA (1281bp) protein (427aa)
Putative membrane protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDV8_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT28051.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
66_010_scaffold_178_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7099..8385)
DNA (1287bp) protein (429aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:EDT13873.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT13873.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102]
Carboxyl-terminal protease n=4 Tax=Clostridium perfringens RepID=B1BWP0_CLOPF
66_010_scaffold_178_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8474..9382)
DNA (909bp) protein (303aa)
Cell division protein FtsX n=7 Tax=Clostridium perfringens RepID=Q8XNN2_CLOPE
ftsX; cell-division protein; K09811 cell division transport system permease protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_010_scaffold_178_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9372..10058)
DNA (687bp) protein (229aa)
Cell-division ATP-binding protein n=10 Tax=Clostridium perfringens RepID=Q8XNN3_CLOPE
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein
Putative cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EIA18417.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_178_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10264..11121)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNN4_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80004.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_178_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11348..12292)
DNA (945bp) protein (315aa)
transketolase, C-terminal subunit; K00615 transketolase [EC:2.2.1.1]
Transketolase n=10 Tax=Clostridium perfringens RepID=H7CS93_CLOPF
Transketolase C-terminal section {ECO:0000313|EMBL:BAB80003.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_178_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12292..13116)
DNA (825bp) protein (275aa)
tktN; transketolase N-terminal section; K00615 transketolase [EC:2.2.1.1]
Transketolase n=9 Tax=Clostridium perfringens RepID=H7CS92_CLOPF
Transketolase {ECO:0000313|EMBL:EIA18414.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_178_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13554..13907)
DNA (354bp) protein (118aa)
PemK family protein; K07171 mRNA interferase [EC:3.1.-.-]
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
mRNA interferase n=10 Tax=Clostridium perfringens RepID=H7CS91_CLOPF
66_010_scaffold_178_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13889..14155)
DNA (267bp) protein (89aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS90_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18412.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_178_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14402..14995)
DNA (594bp) protein (198aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CS89_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18411.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_178_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15056..16555)
DNA (1500bp) protein (500aa)
Carbohydrate kinase family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BK02_CLOPF
Carbohydrate kinase family protein {ECO:0000313|EMBL:EDS79874.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
carbohydrate kinase
66_010_scaffold_178_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16542..16943)
DNA (402bp) protein (134aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
acpS; 4'-phosphopantetheinyl transferase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
Holo-[acyl-carrier-protein] synthase n=7 Tax=Clostridium perfringens RepID=H7CS88_CLOPF
66_010_scaffold_178_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16992..17297)
DNA (306bp) protein (102aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CS87_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18409.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_178_18
unknown

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comp(17272..17430)
DNA (159bp) protein (53aa)

This feature has no annotations

66_010_scaffold_178_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17668..21075
DNA (3408bp) protein (1136aa)
Endo-beta-N-acetylglucosaminidase n=1 Tax=Clostridium perfringens F262 RepID=H7CS86_CLOPF
Endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EIA18408.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
endo-beta-N-acetylglucosaminidase
Displaying 19 items

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