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66_010_scaffold_211

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_211_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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74..3721
DNA (3648bp) protein (1216aa)
cpdB, yfkN; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein (EC:3.1.3.6 3.1.4.16); K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]; K08693 3'-nucleotidase [EC:3.1.3.6]
Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPX5_CLOPF
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT16315.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_211_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3964..7500
DNA (3537bp) protein (1179aa)
cpdB, yfkN; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein (EC:3.1.3.6 3.1.4.16); K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]; K08693 3'-nucleotidase [EC:3.1.3.6]
5'-nucleotidase family protein/Ser/Thr protein phosphatase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BPX6_CLOPF
5'-nucleotidase family protein/Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDT16231.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_211_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7648..8241
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SRN1_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81655.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_211_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8469..9074
DNA (606bp) protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V046_CLOPF
66_010_scaffold_211_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9088..10128
DNA (1041bp) protein (347aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Holliday junction ATP-dependent DNA helicase RuvB n=9 Tax=Clostridium perfringens RepID=RUVB_CLOP1
66_010_scaffold_211_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10150..11175
DNA (1026bp) protein (342aa)
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-); K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000255|HAMAP-Rule:MF_00113}; EC=2.4.99.17 {ECO:0000255|HAMAP-Rule:MF_00113};; Queuosine biosynthesis protein QueA {ECO:0000255|HAMAP-Rule:MF_00113}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=QUEA_CLOPS
66_010_scaffold_211_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11199..12341
DNA (1143bp) protein (381aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29]
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Queuine tRNA-ribosyltransferase n=6 Tax=Clostridium perfringens RepID=TGT_CLOP1
66_010_scaffold_211_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12380..12649
DNA (270bp) protein (90aa)
Preprotein translocase subunit YajC n=9 Tax=Clostridium perfringens RepID=H7CXX1_CLOPF
yajC; preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:ABG85349.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_211_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12845..12985
DNA (141bp) protein (47aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CXX0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25408.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_010_scaffold_211_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13055..14428
DNA (1374bp) protein (458aa)
AstB/chuR-related protein n=1 Tax=Clostridium perfringens F262 RepID=H7CXW9_CLOPF
Radical SAM domain protein {ECO:0000313|EMBL:EDT72790.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
astB/chuR-related protein; K06871 uncharacterized protein
66_010_scaffold_211_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14526..15785
DNA (1260bp) protein (420aa)
Protein translocase subunit SecD n=5 Tax=Clostridium perfringens RepID=H7CXW8_CLOPF
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
66_010_scaffold_211_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15778..16647
DNA (870bp) protein (290aa)
Protein-export membrane protein SecF n=8 Tax=Clostridium perfringens RepID=H7CXW7_CLOPF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF
66_010_scaffold_211_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16847..17701
DNA (855bp) protein (285aa)
DHH domain-containing protein n=9 Tax=Clostridium perfringens RepID=H7CXW6_CLOPF
DHH domain-containing protein
DHH domain protein {ECO:0000313|EMBL:EDT16263.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_211_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17745..18263
DNA (519bp) protein (173aa)
apt; adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000255|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00004};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Adenine phosphoribosyltransferase n=10 Tax=Clostridium perfringens RepID=APT_CLOP1
Displaying 14 items

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