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66_010_scaffold_275

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_010_scaffold_275_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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174..848
DNA (675bp) protein (225aa)
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4); K01619 deoxyribose-phosphate aldolase [EC:4.1.2.4]
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Deoxyribose-phosphate aldolase n=3 Tax=Clostridium perfringens RepID=DEOC_CLOP1
66_010_scaffold_275_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1049..3334
DNA (2286bp) protein (762aa)
ATP-dependent protease n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIG6_CLOPF
ATP-dependent protease {ECO:0000313|EMBL:EDS80446.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
ATP-dependent protease
66_010_scaffold_275_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3468..3803
DNA (336bp) protein (112aa)
Anti-sigma F factor antagonist n=11 Tax=Clostridium perfringens RepID=H7CY76_CLOPF
spoIIAA; anti-sigma F factor antagonist; K06378 stage II sporulation protein AA (anti-sigma F factor antagonist)
Anti-sigma F factor antagonist {ECO:0000256|RuleBase:RU003749}; Stage II sporulation protein {ECO:0000256|RuleBase:RU003749}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_010_scaffold_275_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3817..4239
DNA (423bp) protein (141aa)
spoIIAB; anti-sigma F factor (EC:2.7.11.1); K06379 stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
Anti-sigma F factor {ECO:0000256|HAMAP-Rule:MF_00637}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00637};; Stage II sporulation protein AB {ECO:0000256|HAMAP-Rule:MF_00637}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Anti-sigma F factor n=10 Tax=Clostridium perfringens RepID=SP2AB_CLOP1
66_010_scaffold_275_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4257..5018
DNA (762bp) protein (254aa)
RNA polymerase sigma factor n=10 Tax=Clostridium perfringens RepID=H7CY74_CLOPF
sigF; sporulation sigma factor SigF; K03091 RNA polymerase sporulation-specific sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
66_010_scaffold_275_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5149..5619
DNA (471bp) protein (157aa)
Stage V sporulation protein AC n=4 Tax=Clostridium perfringens RepID=Q0SRC9_CLOPS
spoVAC; stage V sporulation protein AC; K06405 stage V sporulation protein AC
Stage V sporulation protein AC {ECO:0000313|EMBL:EDT15270.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_010_scaffold_275_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5622..6641
DNA (1020bp) protein (340aa)
Stage V sporulation protein AD n=6 Tax=Clostridium perfringens RepID=Q8XIR8_CLOPE
spoVAD; stage V sporulation protein AD; K06406 stage V sporulation protein AD
Stage V sporulation protein AD {ECO:0000313|EMBL:EDT73154.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_010_scaffold_275_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6693..7049
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=7 Tax=Clostridium perfringens RepID=H7CY71_CLOPF
Stage V sporulation protein AE {ECO:0000313|EMBL:EDT27792.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
spoVAE; stage V sporulation protein AE; K06407 stage V sporulation protein AE
66_010_scaffold_275_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7101..8756
DNA (1656bp) protein (552aa)
Competence family protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIH2_CLOPF
Competence family protein {ECO:0000313|EMBL:EDS80366.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
comC competence related protein; K02238 competence protein ComEC
66_010_scaffold_275_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8800..9846
DNA (1047bp) protein (349aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EDS80258.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDS80258.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
holA; DNA polymerase III subunit delta (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III, delta subunit n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BIH3_CLOPF
66_010_scaffold_275_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9942..10205)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=8 Tax=Clostridium perfringens RepID=RS20_CLOP1
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_010_scaffold_275_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10401..11378
DNA (978bp) protein (326aa)
gpr; germination protease; K06012 spore protease [EC:3.4.24.78]
Germination protease {ECO:0000255|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000255|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000255|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000255|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000255|HAMAP-Rule:MF_00626}; Flags: Precursor;; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Germination protease n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=GPR_CLOPE
66_010_scaffold_275_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11527..12612
DNA (1086bp) protein (362aa)
Stage II sporulation protein P n=3 Tax=Clostridium perfringens RepID=Q0TNS0_CLOP1
stage II sporulation protein P; K06385 stage II sporulation protein P
Stage II sporulation protein P {ECO:0000313|EMBL:BAB81746.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
66_010_scaffold_275_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12679..13029
DNA (351bp) protein (117aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q0SRD7_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG85483.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
66_010_scaffold_275_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13150..14952
DNA (1803bp) protein (601aa)
Elongation factor 4 {ECO:0000255|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000255|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000255|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000255|HAMAP-Rule:MF_00071}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Elongation factor 4 n=4 Tax=Clostridium perfringens RepID=LEPA_CLOPE
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA
Displaying 15 items

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