ggKbase home page

66_011_scaffold_133

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_011_scaffold_133_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

183..2804
DNA (2622bp) protein (874aa)
ATPase P; K01537 Ca2+-transporting ATPase [EC:3.6.3.8]
Putative potassium/sodium efflux P-type ATPase, fungal-type n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QPR1_9CLOT
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:EKY29552.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
66_011_scaffold_133_2
Bacillus sp. SG-1, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2846..3379)
DNA (534bp) protein (178aa)
GCN5 family N-acetyltransferase n=1 Tax=Bacillus sp. AP8 RepID=UPI0003093168
Uncharacterized protein {ECO:0000313|EMBL:EDL64508.1}; TaxID=161544 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SG-1.;"
GNAT family acetyltransferase
66_011_scaffold_133_3
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3498..3971
DNA (474bp) protein (158aa)
msrA; peptide methionine sulfoxide reductase MsrA (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M8W8_9CLOT
66_011_scaffold_133_4
unknown

Not on your lists

comp(4099..4641)
DNA (543bp) protein (181aa)

This feature has no annotations

66_011_scaffold_133_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4657..6549)
DNA (1893bp) protein (631aa)
membrane protein n=1 Tax=Clostridium botulinum RepID=UPI00036F968B
Fusaric acid resistance-like family protein {ECO:0000313|EMBL:AIY79778.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
hypothetical protein
66_011_scaffold_133_6
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6724..7761)
DNA (1038bp) protein (346aa)
Peptidase M42 family protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ65_ALKOO
peptidase M42 family protein
Peptidase M42 family protein {ECO:0000313|EMBL:ABW19847.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
66_011_scaffold_133_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7836..9713)
DNA (1878bp) protein (626aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein n=2 Tax=Clostridium difficile RepID=T2YYG2_CLODI
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein {ECO:0000313|EMBL:EQE70230.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
htpG; heat shock protein 90; K04079 molecular chaperone HtpG
66_011_scaffold_133_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9812..10423)
DNA (612bp) protein (204aa)
UPI0003D66826 related cluster n=1 Tax=unknown RepID=UPI0003D66826
Uncharacterized protein {ECO:0000313|EMBL:KJZ92872.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
66_011_scaffold_133_9
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10466..10966)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KMJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB74730.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
hypothetical protein
66_011_scaffold_133_10
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10976..11524)
DNA (549bp) protein (183aa)
Conserved hypothetical phage-related protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KXT0_9CLOT
Conserved hypothetical phage-related protein {ECO:0000313|EMBL:CDB74731.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
phage-like protein
66_011_scaffold_133_11
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11762..12097
DNA (336bp) protein (112aa)
Transcriptional regulator PadR family protein n=1 Tax=Clostridium intestinale URNW RepID=U2NKN4_9CLOT
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:ERK29698.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
transcriptional regulator PadR family
66_011_scaffold_133_12
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12085..12777
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q1M9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK29954.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
66_011_scaffold_133_13
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12864..13814)
DNA (951bp) protein (317aa)
Polysaccharide deacetylase family protein n=1 Tax=Clostridium sp. CAG:265 RepID=R6KVZ0_9CLOT
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:CDB74076.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
polysaccharide deacetylase
66_011_scaffold_133_14
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13918..14223)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25115.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
66_011_scaffold_133_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14234..15436)
DNA (1203bp) protein (401aa)
DHHA1 domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BL21_CLOPF
DHHA1 domain protein {ECO:0000313|EMBL:EDS79527.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
DHH domain-containing protein; K07050
66_011_scaffold_133_16
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15429..16946)
DNA (1518bp) protein (506aa)
Transcriptional regulator, GntR family with aminotransferase domain containing protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4C2_9CLOT
Transcriptional regulator, GntR family with aminotransferase domain containing protein {ECO:0000313|EMBL:EHJ01263.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
yisV2; HTH-type transcriptional regulator YisV
66_011_scaffold_133_17
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17276..17683)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MV33_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43327.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
66_011_scaffold_133_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17676..18212)
DNA (537bp) protein (179aa)
BioY family protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MUI8_CLOSA
BioY family protein
BioY family protein {ECO:0000313|EMBL:AGX43326.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
66_011_scaffold_133_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18344..19507)
DNA (1164bp) protein (388aa)
NADH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EES49177.1}; EC=1.1.1.- {ECO:0000313|EMBL:EES49177.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
NADH-dependent butanol dehydrogenase a; K00100 [EC:1.1.1.-]
NADH-dependent butanol dehydrogenase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5URI3_CLOBO
66_011_scaffold_133_20
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19767..20327
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH28_CLOBU
RNA-binding region-containing protein (RNP-1) {ECO:0000313|EMBL:EHI97898.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
66_011_scaffold_133_21
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20383..22575)
DNA (2193bp) protein (731aa)
Transglutaminase domain-containing protein n=7 Tax=Clostridium thermocellum RepID=A3DEN4_CLOTH
Uncharacterized protein {ECO:0000313|EMBL:CDM69483.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
transglutaminase-like protein
66_011_scaffold_133_22
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22577..23710)
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) RepID=A3DEN5_CLOTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN52414.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
66_011_scaffold_133_23
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23936..24559)
DNA (624bp) protein (208aa)
ATPase associated with various cellular activities AAA_3 n=7 Tax=Clostridium thermocellum RepID=A3DEN6_CLOTH
Uncharacterized protein {ECO:0000313|EMBL:CDM69485.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
ATPase
66_011_scaffold_133_24
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24655..24960)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AIY83797.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
hypothetical protein
66_011_scaffold_133_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25174..26634)
DNA (1461bp) protein (487aa)
sucrose-6-phosphate dehydrogenase (EC:3.2.1.26); K01193 beta-fructofuranosidase [EC:3.2.1.26]
Sucrose-6-phosphate dehydrogenase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RPT0_CLOPF
Sucrose-6-P hydrolase {ECO:0000313|EMBL:BAB81238.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Displaying 25 items

View Taxonomy