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66_011_scaffold_140

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_011_scaffold_140_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19..762)
DNA (744bp) protein (248aa)
Peptidoglycan N-acetylglucosamine deacetylase {ECO:0000313|EMBL:CDH91490.1}; EC=3.5.1.- {ECO:0000313|EMBL:CDH91490.1};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
Peptidoglycan N-acetylglucosamine deacetylase n=2 Tax=Clostridium botulinum B RepID=B2TNG9_CLOBB
peptidoglycan N-acetylglucosamine deacetylase
66_011_scaffold_140_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

938..2239
DNA (1302bp) protein (434aa)
D-alanyl-D-alanine carboxypeptidase; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
Putative Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FAR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU72734.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
66_011_scaffold_140_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2262..4268)
DNA (2007bp) protein (669aa)
HAMP/methyl-accepting chemotaxis signalling domain protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UXH2_CLOBO
HAMP/methyl-accepting chemotaxis signalling domain protein {ECO:0000313|EMBL:EES50243.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
putative membrane-associated methyl-accepting chemotaxis protein fused to hamp domain; K03406 methyl-accepting chemotaxis protein
66_011_scaffold_140_4
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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4401..6698
DNA (2298bp) protein (766aa)
hypF; carbamoyltransferase HypF2 (EC:2.1.3.-)
Carbamoyltransferase HypF n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CI22_9FIRM
Carbamoyltransferase HypF {ECO:0000313|EMBL:ERI90154.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
66_011_scaffold_140_5
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6750..7328
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WK14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03466.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
flavin reductase domain protein FMN-binding protein
66_011_scaffold_140_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7383..7955
DNA (573bp) protein (191aa)
Putative Hydrolase, NUDIX family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EXL7_9CLOT
Putative Hydrolase, NUDIX family {ECO:0000313|EMBL:CDG00971.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
nudix domain protein
66_011_scaffold_140_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7991..8338)
DNA (348bp) protein (116aa)
Arsenate reductase n=3 Tax=Clostridium acetobutylicum RepID=F0K5K5_CLOAE
ArsC family transcriptional regulator {ECO:0000313|EMBL:KJU72732.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
Arsenate reductase
66_011_scaffold_140_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8347..8982)
DNA (636bp) protein (212aa)
pyrophosphatase PpaX (EC:3.6.1.1); K06019 pyrophosphatase PpaX [EC:3.6.1.1]
HAD-superfamily hydrolase, subfamily IA n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REG0_CLOPF
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:AIY82294.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
66_011_scaffold_140_9
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9109..9675)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6XSF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD26653.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
nicotinamidase-like amidase
66_011_scaffold_140_10
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9689..10492)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5X9_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ80308.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
66_011_scaffold_140_11
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10582..11616
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XUS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03463.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
putative acyltransferase
66_011_scaffold_140_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11706..12749)
DNA (1044bp) protein (348aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
aldose 1-epimerase; K01785 aldose 1-epimerase [EC:5.1.3.3]
Aldose 1-epimerase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CG48_9CLOT
66_011_scaffold_140_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12951..14123
DNA (1173bp) protein (391aa)
galK; galactokinase GalK (EC:2.7.1.6)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Galactokinase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N4N1_9CLOT
66_011_scaffold_140_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14135..15124
DNA (990bp) protein (330aa)
galE2; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
UDP-glucose 4-epimerase GalE {ECO:0000313|EMBL:AGX41865.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AGX41865.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
UDP-glucose 4-epimerase GalE n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMQ0_CLOSA
66_011_scaffold_140_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15137..16630
DNA (1494bp) protein (498aa)
galT; galactose-1-phosphate uridylyltransferase GalT (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Galactose-1-phosphate uridylyltransferase GalT n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MM30_CLOSA
66_011_scaffold_140_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16645..17676
DNA (1032bp) protein (344aa)
Catabolite control protein A n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MMV4_CLOSA
ccpA; catabolite control protein A
Catabolite control protein A {ECO:0000313|EMBL:AGX41863.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
66_011_scaffold_140_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17794..18003
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H581_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99552.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein; K03704 cold shock protein (beta-ribbon, CspA family)
66_011_scaffold_140_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18068..20209)
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HFE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98563.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sensor histidine kinase
66_011_scaffold_140_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20196..20900)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98564.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
two-component response regulator
66_011_scaffold_140_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21013..21627)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3J6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98565.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein; K09778 hypothetical protein
66_011_scaffold_140_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21608..22834)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H819_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98566.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
group 1 glycosyl transferase
66_011_scaffold_140_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22847..23362)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98567.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
DedA family protein
66_011_scaffold_140_23
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23556..23741
DNA (186bp) protein (62aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=Q8XNS9_CLOPE
Uncharacterized protein {ECO:0000313|EMBL:CDM68248.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
hypothetical protein
66_011_scaffold_140_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23755..24003
DNA (249bp) protein (83aa)
Spore coat protein F n=2 Tax=Clostridium botulinum B RepID=B2TRT4_CLOBB
Coat F domain protein {ECO:0000313|EMBL:AIY81314.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
spore coat protein CotF
66_011_scaffold_140_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24098..24955)
DNA (858bp) protein (286aa)
UPI0003D59403 related cluster n=1 Tax=unknown RepID=UPI0003D59403
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA {ECO:0000313|EMBL:ETI90083.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
thioredoxin reductase
66_011_scaffold_140_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24970..25281)
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZ86_CLOPF
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
trx; thioredoxin; K03671 thioredoxin 1
66_011_scaffold_140_27
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25375..25839)
DNA (465bp) protein (155aa)
GCN5-related N-acetyltransferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U4L4_ETHHY
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADU26642.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
Displaying 27 items

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