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66_011_scaffold_168

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_011_scaffold_168_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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177..1064
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTC9_9CLOT
LysR family transcriptional regulator {ECO:0000313|EMBL:EOR20267.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
transcriptional regulator
66_011_scaffold_168_2
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1073..2038)
DNA (966bp) protein (322aa)
trans-hexaprenyltranstransferase (EC:2.5.1.30); K00805 heptaprenyl diphosphate synthase [EC:2.5.1.30]
Trans-hexaprenyltranstransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT72_9CLOT
Trans-hexaprenyltranstransferase {ECO:0000313|EMBL:EOR20268.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
66_011_scaffold_168_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2041..2568)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20269.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
66_011_scaffold_168_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2581..2979)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8S8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99283.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
66_011_scaffold_168_5
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3108..4979)
DNA (1872bp) protein (624aa)
NADH dehydrogenase (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3]
NADH dehydrogenase n=1 Tax=Clostridium intestinale URNW RepID=U2NSJ4_9CLOT
NADH dehydrogenase {ECO:0000313|EMBL:ERK32143.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
66_011_scaffold_168_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5336..5782
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99285.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
lipoprotein
66_011_scaffold_168_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5887..6927
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H530_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99286.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein
66_011_scaffold_168_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6987..8027)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEW4_9CLOT
37-kD nucleoid-associated bacterial family protein {ECO:0000313|EMBL:AIY84231.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
hypothetical protein
66_011_scaffold_168_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8102..9694)
DNA (1593bp) protein (531aa)
Na/Pi cotransporter n=1 Tax=Clostridium sp. JC122 RepID=UPI0002885DFD
Na/Pi-cotransporter family protein/PhoU family protein; K03324 phosphate:Na+ symporter
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:KIL09207.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
66_011_scaffold_168_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9868..10641)
DNA (774bp) protein (258aa)
Sortase, SrtB family {ECO:0000313|EMBL:AIY84337.1}; EC=3.4.22.71 {ECO:0000313|EMBL:AIY84337.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q0A1_9CLOT
surface protein cell wall anchor, sortase_B
66_011_scaffold_168_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10677..11384)
DNA (708bp) protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
deoD; purine nucleoside phosphorylase; K03784 purine-nucleoside phosphorylase [EC:2.4.2.1]
Purine nucleoside phosphorylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H757_9CLOT
66_011_scaffold_168_12
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11553..12086
DNA (534bp) protein (178aa)
adenylate cyclase; K05873 adenylate cyclase, class 2 [EC:4.6.1.1]
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ02634.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
66_011_scaffold_168_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12192..13025)
DNA (834bp) protein (278aa)
tyrA; prephenate dehydrogenase TyrA (EC:1.3.1.12)
Prephenate dehydrogenase TyrA {ECO:0000313|EMBL:AGF59047.1}; EC=1.3.1.12 {ECO:0000313|EMBL:AGF59047.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Prephenate dehydrogenase TyrA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N6L6_9CLOT
66_011_scaffold_168_14
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13046..14083)
DNA (1038bp) protein (346aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase AroF (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase AroF {ECO:0000313|EMBL:AGF59048.1}; EC=2.5.1.54 {ECO:0000313|EMBL:AGF59048.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase AroF n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MSB8_9CLOT
66_011_scaffold_168_15
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14184..14612)
DNA (429bp) protein (143aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
3-dehydroquinate dehydratase; K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G3L9_CLOPA
66_011_scaffold_168_16
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14617..15132)
DNA (516bp) protein (172aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
aroK; shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9XSI9_9CLOT
66_011_scaffold_168_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15148..15954)
DNA (807bp) protein (269aa)
aroE; shikimate dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25]
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Shikimate dehydrogenase n=12 Tax=Clostridium difficile RepID=C9XT73_CLODC
66_011_scaffold_168_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15965..17104)
DNA (1140bp) protein (380aa)
P-protein (EC:4.2.1.51 5.4.99.5); K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
Chorismate mutase n=2 Tax=Clostridium butyricum RepID=M8JNE4_CLOBU
PheA {ECO:0000313|EMBL:KHD16358.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
66_011_scaffold_168_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17092..18186)
DNA (1095bp) protein (365aa)
aroC; chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
Chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase) {ECO:0000313|EMBL:CAJ68706.1}; EC=4.2.3.5 {ECO:0000313|EMBL:CAJ68706.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Chorismate synthase n=1 Tax=Clostridium difficile CD69 RepID=T3A6P0_CLODI
66_011_scaffold_168_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18164..19462)
DNA (1299bp) protein (433aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MC93_9CLOT
66_011_scaffold_168_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19462..20526)
DNA (1065bp) protein (355aa)
aroB; 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
3-dehydroquinate synthase n=1 Tax=Clostridium difficile P38 RepID=T4PN73_CLODI
66_011_scaffold_168_22
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20545..21540)
DNA (996bp) protein (332aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EDS09021.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EDS09021.1};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
aroF; 3-deoxy-7-phosphoheptulonate synthase; K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHQ3_9FIRM
Displaying 22 items

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