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66_011_scaffold_172

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_011_scaffold_172_1
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1292)
DNA (1290bp) protein (430aa)
PTS system transcriptional activator n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PVA3_9CLOT
PTS system transcriptional activator {ECO:0000313|EMBL:EET86833.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
PTS system transcriptional activator
66_011_scaffold_172_2
alpha proteobacterium RS24, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1409..2188)
DNA (780bp) protein (260aa)
4-hydroxy-3-methylbut-2-enyl-diphosphate synthase protein {ECO:0000313|EMBL:ERL47062.1}; EC=1.17.7.1 {ECO:0000313|EMBL:ERL47062.1};; TaxID=1397666 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium RS24.;"
4-hydroxy-3-methylbut-2-enyl-diphosphate synthase protein n=1 Tax=alpha proteobacterium RS24 RepID=U2XPJ1_9PROT
response regulator receiver modulated metal dependent phosphohydrolase
66_011_scaffold_172_3
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2185..2541)
DNA (357bp) protein (119aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z8W5_CYAAP
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AFZ55040.1}; TaxID=755178 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium aponinum (strain PCC 10605).;"
66_011_scaffold_172_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2575..4662)
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HER8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96724.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
66_011_scaffold_172_5
RIFOXYB12_FULL_Sulfurimonas_35_9_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4646..5677)
DNA (1032bp) protein (344aa)
hisitdine kinase n=1 Tax=Geovibrio thiophilus RepID=UPI0003B43E3D
response regulator receiver modulated metal dependent phosphohydrolase; K07814 putative two-component system response regulator
Tax=RIFOXYB12_FULL_Sulfurimonas_35_9_curated
66_011_scaffold_172_6
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5963..7438
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C514_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72782.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
66_011_scaffold_172_7
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7844..9148
DNA (1305bp) protein (435aa)
MATE efflux family protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AYF6_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EMZ31468.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
MATE efflux family protein
66_011_scaffold_172_8
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9448..10242
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YYL6_CLOBU
Mobile element protein {ECO:0000313|EMBL:KJZ96582.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
transposase
66_011_scaffold_172_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10361..11107)
DNA (747bp) protein (249aa)
polysaccharide deacetylase n=1 Tax=Clostridium botulinum RepID=UPI0003700BD1
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:AIY79739.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
polysaccharide deacetylase
66_011_scaffold_172_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11298..11780)
DNA (483bp) protein (161aa)
NH2-acetyltransferase n=2 Tax=Clostridium butyricum RepID=B1R2B5_CLOBU
NH2-acetyltransferase {ECO:0000313|EMBL:EEP56440.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
NH2-acetyltransferase
66_011_scaffold_172_11
unknown

Not on your lists

comp(11935..12099)
DNA (165bp) protein (55aa)

This feature has no annotations

66_011_scaffold_172_trna_1
unknown

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comp(12535..12606)
DNA (72bp)
transferRNA Trp
66_011_scaffold_172_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12752..13651)
DNA (900bp) protein (300aa)
Putative ABC transporter substrate-binding lipoprotein n=2 Tax=Clostridium botulinum E RepID=B2V072_CLOBA
putative ABC transporter substrate-binding lipoprotein
Putative ABC transporter substrate-binding lipoprotein {ECO:0000313|EMBL:EES49899.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
66_011_scaffold_172_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13876..14337
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R166_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55568.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ydiB; UPF0079 ATP-binding protein YdiB
66_011_scaffold_172_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14334..15038
DNA (705bp) protein (235aa)
Glycoprotease n=1 Tax=Clostridium sp. CAG:221 RepID=R6FY95_9CLOT
tRNA threonylcarbamoyl adenosine modification protein YeaZ {ECO:0000313|EMBL:AIY83927.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ
66_011_scaffold_172_15
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15031..15471
DNA (441bp) protein (147aa)
rimI; putative ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
Putative ribosomal-protein-alanine acetyltransferase RimI {ECO:0000313|EMBL:AGF54502.1}; EC=2.3.1.128 {ECO:0000313|EMBL:AGF54502.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Putative ribosomal-protein-alanine acetyltransferase RimI n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MSD9_9CLOT
66_011_scaffold_172_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15676..16278)
DNA (603bp) protein (201aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1P4_CLOB8
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily
HAD family hydrolase {ECO:0000313|EMBL:AJH01480.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
66_011_scaffold_172_17
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16418..17071
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B7W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85411.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
66_011_scaffold_172_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17111..18811)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H336_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97311.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
pyridine nucleotide-disulfide oxidoreductase family protein
66_011_scaffold_172_19
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18825..19145)
DNA (321bp) protein (107aa)
Rhodanese domain protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SPJ4_CLOC7
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ADL50043.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
66_011_scaffold_172_20
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19282..19482
DNA (201bp) protein (67aa)
4Fe-4S ferredoxin n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAZ7_9CLOT
4Fe-4S ferredoxin {ECO:0000313|EMBL:EOR26487.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
4Fe-4S ferredoxin
66_011_scaffold_172_21
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19482..20066
DNA (585bp) protein (195aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CV87_CLOSO
Membrane protein {ECO:0000313|EMBL:KEZ85727.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
66_011_scaffold_172_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20309..21037)
DNA (729bp) protein (243aa)
UPI0003D69653 related cluster n=1 Tax=unknown RepID=UPI0003D69653
DeoR-family transcriptional regulator {ECO:0000313|EMBL:ETI87910.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Displaying 23 items

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