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66_011_scaffold_235

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
66_011_scaffold_235_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(95..853)
DNA (759bp) protein (253aa)
Formate/nitrite transporter family protein n=3 Tax=Clostridium perfringens RepID=B1RTC5_CLOPF
Formate/nitrite transporter family protein {ECO:0000313|EMBL:EDT71253.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
formate/nitrite transporter family protein
66_011_scaffold_235_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1225..2274)
DNA (1050bp) protein (350aa)
Gfo/Idh/MocA family oxidoreductase; K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
Oxidoreductase, Gfo/Idh/MocA family n=4 Tax=Clostridium perfringens RepID=Q0TUY8_CLOP1
Oxidoreductase, Gfo/Idh/MocA family {ECO:0000313|EMBL:EDT22662.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_011_scaffold_235_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2362..3951)
DNA (1590bp) protein (530aa)
Sodium/solute symporter family protein n=6 Tax=Clostridium perfringens RepID=Q0TUY9_CLOP1
symporter YidK; K03307 solute:Na+ symporter, SSS family
Sodium/solute symporter family protein {ECO:0000313|EMBL:EDT71278.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
66_011_scaffold_235_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4033..4926)
DNA (894bp) protein (298aa)
Inosose dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; EC=4.2.1.44 {ECO:0000256|HAMAP-Rule:MF_01672};; 2-keto-myo-inositol dehydratase {ECO:0000256|HAMAP-Rule:MF_01672}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
iolE; myo-inositol catabolism protein IolE; K03335 inosose dehydratase [EC:4.2.1.44]
Inosose dehydratase n=5 Tax=Clostridium perfringens RepID=H7CRN8_CLOPF
66_011_scaffold_235_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5045..6046)
DNA (1002bp) protein (334aa)
myo-inositol 2-dehydrogenase (EC:1.1.1.18); K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
Myo-inositol 2-dehydrogenase {ECO:0000313|EMBL:EDT13633.1}; EC=1.1.1.18 {ECO:0000313|EMBL:EDT13633.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Myo-inositol 2-dehydrogenase n=9 Tax=Clostridium perfringens RepID=Q0TUZ1_CLOP1
66_011_scaffold_235_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6122..8041)
DNA (1920bp) protein (640aa)
iolD; myo-inositol catabolism protein IolD; K03336 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [EC:3.7.1.-]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000256|HAMAP-Rule:MF_01669}; Short=THcHDO hydrolase {ECO:0000256|HAMAP-Rule:MF_01669};; EC=3.7.1.22 {ECO:0000256|HAMAP-Rule:MF_01669};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXE4_CLOPF
66_011_scaffold_235_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8058..8825)
DNA (768bp) protein (256aa)
iolB; myo-inositol catabolism protein; K03337 5-deoxy-glucuronate isomerase [EC:5.3.1.-]
Myo-inositol catabolism protein n=8 Tax=Clostridium perfringens RepID=H7CRN5_CLOPF
Myo-inositol catabolism protein {ECO:0000313|EMBL:EIA18667.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
66_011_scaffold_235_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8839..9855)
DNA (1017bp) protein (339aa)
myo-inositol catabolism protein IolC; K03338 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
5-dehydro-2-deoxygluconokinase {ECO:0000256|HAMAP-Rule:MF_01668}; EC=2.7.1.92 {ECO:0000256|HAMAP-Rule:MF_01668};; 2-deoxy-5-keto-D-gluconate kinase {ECO:0000256|HAMAP-Rule:MF_01668}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
5-dehydro-2-deoxygluconokinase n=7 Tax=Clostridium perfringens RepID=IOLC_CLOP1
66_011_scaffold_235_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9869..10714)
DNA (846bp) protein (282aa)
alf1; fructose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:EIA18665.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EIA18665.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
Fructose-bisphosphate aldolase n=5 Tax=Clostridium perfringens RepID=H7CRN3_CLOPF
66_011_scaffold_235_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10721..11875)
DNA (1155bp) protein (385aa)
Alcohol dehydrogenase, iron-containing n=7 Tax=Clostridium perfringens RepID=Q0TUZ6_CLOP1
alcohol dehydrogenase
Alcohol dehydrogenase, iron-containing {ECO:0000313|EMBL:EDT22669.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
66_011_scaffold_235_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12357..13127
DNA (771bp) protein (257aa)
Transcription repressor of myo-inositol catabolism operon n=7 Tax=Clostridium perfringens RepID=Q8XP81_CLOPE
iolR; transcription repressor of myo-inositol catabolism operon; K06608 DeoR family transcriptional regulator, myo-inositol catabolism operon repressor
Putative transcriptional regulator IolR {ECO:0000313|EMBL:EDT13636.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
66_011_scaffold_235_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13485..14108)
DNA (624bp) protein (208aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase family protein n=5 Tax=Clostridium perfringens RepID=Q0TUZ8_CLOP1
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EDT25721.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Displaying 12 items

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