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69_002_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_25_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..160)
DNA (159bp) protein (53aa)
rRNA large subunit methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000255|HAMAP-Rule:MF_00658}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Staphylococcus epidermidis RepID=D1WJ84_STAEP
69_002_scaffold_25_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1214..2014)
DNA (801bp) protein (267aa)
Metallo-beta-lactamase family protein YycJ n=49 Tax=Staphylococcus epidermidis RepID=Q5HK22_STAEQ
yycJ; metallo-beta-lactamase YycJ
Metallo-beta-lactamase family protein YycJ {ECO:0000313|EMBL:AAW53338.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
69_002_scaffold_25_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2623..3414)
DNA (792bp) protein (264aa)
YycI protein n=21 Tax=Staphylococcus epidermidis RepID=Q5HK21_STAEQ
yycI; hypothetical protein
YycI protein {ECO:0000313|EMBL:AAW53339.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
69_002_scaffold_25_4
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3415..4701)
DNA (1287bp) protein (429aa)
YycH protein n=10 Tax=Staphylococcus epidermidis RepID=C5QYL9_STAEP
YycH protein {ECO:0000313|EMBL:ETJ09083.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
yycH; hypothetical protein
69_002_scaffold_25_5
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4745..6577)
DNA (1833bp) protein (611aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
two-component sensor histidine kinase; K07652 two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
Sensor protein kinase WalK n=68 Tax=Staphylococcus RepID=WALK_STAEQ
69_002_scaffold_25_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6590..7291)
DNA (702bp) protein (234aa)
Transcriptional regulatory protein WalR n=76 Tax=Staphylococcus epidermidis RepID=WALR_STAEQ
response regulator; K07668 two-component system, OmpR family, response regulator VicR
Transcriptional regulatory protein WalR; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
69_002_scaffold_25_trna_2
unknown

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comp(7768..7840)
DNA (73bp)
transferRNA Asp
69_002_scaffold_25_trna_1
unknown

Not on your lists

comp(7849..7920)
DNA (72bp)
transferRNA Glu
69_002_scaffold_25_7
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8339..9622)
DNA (1284bp) protein (428aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4]
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Adenylosuccinate synthetase n=62 Tax=Staphylococcus epidermidis RepID=PURA_STAEQ
69_002_scaffold_25_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9901..11301)
DNA (1401bp) protein (467aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
Replicative DNA helicase n=76 Tax=Staphylococcus epidermidis RepID=Q5HK15_STAEQ
Replicative DNA helicase {ECO:0000313|EMBL:ESV21064.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_25_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(11472..11918)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=14 Tax=Staphylococcus epidermidis RepID=C5QYM4_STAEP
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9
69_002_scaffold_25_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11915..13882)
DNA (1968bp) protein (656aa)
DHHA1 domain protein n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QYM5_STAEP
DHHA1 domain protein {ECO:0000313|EMBL:EES35503.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
69_002_scaffold_25_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13911..14837)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QYM6_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES35504.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
69_002_scaffold_25_12
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15065..16033)
DNA (969bp) protein (323aa)
homoserine-o-acetyltransferase; K00641 homoserine O-acetyltransferase [EC:2.3.1.31]
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Alpha/beta hydrolase fold family protein n=56 Tax=Staphylococcus epidermidis RepID=E6JQG9_STAEP
69_002_scaffold_25_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16323..16652)
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=J0F2I0_STAEP
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:EES35506.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
69_002_scaffold_25_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16649..17341)
DNA (693bp) protein (231aa)
Azaleucine resistance protein AzlC n=19 Tax=Staphylococcus epidermidis RepID=N6AB46_STAEP
Putative azaleucine resistance protein AzlC {ECO:0000313|EMBL:EFE58677.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
azlC protein
69_002_scaffold_25_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17706..18710
DNA (1005bp) protein (335aa)
hlb; beta-hemolysin; K01114 phospholipase C [EC:3.1.4.3]
Phospholipase C n=11 Tax=Staphylococcus epidermidis RepID=V4Q662_STAEP
Phospholipase C {ECO:0000313|EMBL:ESV21058.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_25_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19239..20525)
DNA (1287bp) protein (429aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase n=18 Tax=Staphylococcus epidermidis RepID=C5QYN1_STAEP
69_002_scaffold_25_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21353..22186
DNA (834bp) protein (278aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=40 Tax=Staphylococcus epidermidis RepID=C5QYN2_STAEP
hypothetical protein
69_002_scaffold_25_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(22584..25265)
DNA (2682bp) protein (894aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=16 Tax=Staphylococcus epidermidis RepID=C5QYN3_STAEP
69_002_scaffold_25_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25302..27233)
DNA (1932bp) protein (644aa)
DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
DNA gyrase subunit B n=20 Tax=Staphylococcus epidermidis RepID=C5QYN4_STAEP
69_002_scaffold_25_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27244..28359)
DNA (1116bp) protein (372aa)
DNA replication and repair protein RecF n=1 Tax=Staphylococcus epidermidis NIHLM023 RepID=J1ABB6_STAEP
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
recF; recombination protein F; K03629 DNA replication and repair protein RecF
69_002_scaffold_25_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28356..28592)
DNA (237bp) protein (79aa)
Uncharacterized protein n=76 Tax=Staphylococcus epidermidis RepID=Q5HK01_STAEQ
hypothetical protein
RNA-binding protein {ECO:0000313|EMBL:ESV21052.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_25_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29025..30158)
DNA (1134bp) protein (378aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta n=37 Tax=Staphylococcus epidermidis RepID=C5QYN7_STAEP
69_002_scaffold_25_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30470..31825)
DNA (1356bp) protein (452aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Staphylococcus epidermidis RepID=J0F2I8_STAEP
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
dnaA; chromosome replication initiator DnaA; K02313 chromosomal replication initiator protein
69_002_scaffold_25_24
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32870..33217
DNA (348bp) protein (116aa)
rnpA; ribonuclease P (EC:3.1.26.5); K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Ribonuclease P protein component n=70 Tax=Staphylococcus epidermidis RepID=RNPA_STAEQ
69_002_scaffold_25_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33363..34742
DNA (1380bp) protein (460aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-]
tRNA modification GTPase MnmE n=21 Tax=Staphylococcus epidermidis RepID=E6JQI2_STAEP
69_002_scaffold_25_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34815..36692
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=46 Tax=Staphylococcus epidermidis RepID=MNMG_STAEQ
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
69_002_scaffold_25_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

36692..37411
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
gidB; 16S rRNA methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G n=23 Tax=Staphylococcus epidermidis RepID=E6JQI4_STAEP
69_002_scaffold_25_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

37455..38294
DNA (840bp) protein (280aa)
ParB-like protein n=20 Tax=Staphylococcus epidermidis RepID=C5QYP4_STAEP
ParB-like protein {ECO:0000313|EMBL:EES35522.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
DNA-binding protein Spo0J-like protein; K03497 chromosome partitioning protein, ParB family
Displaying items 1-30 of 64 in total

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